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The somatic genomic landscape of glioblastoma.

Publication ,  Journal Article
Brennan, CW; Verhaak, RGW; McKenna, A; Campos, B; Noushmehr, H; Salama, SR; Zheng, S; Chakravarty, D; Sanborn, JZ; Berman, SH; Beroukhim, R ...
Published in: Cell
October 10, 2013

We describe the landscape of somatic genomic alterations based on multidimensional and comprehensive characterization of more than 500 glioblastoma tumors (GBMs). We identify several novel mutated genes as well as complex rearrangements of signature receptors, including EGFR and PDGFRA. TERT promoter mutations are shown to correlate with elevated mRNA expression, supporting a role in telomerase reactivation. Correlative analyses confirm that the survival advantage of the proneural subtype is conferred by the G-CIMP phenotype, and MGMT DNA methylation may be a predictive biomarker for treatment response only in classical subtype GBM. Integrative analysis of genomic and proteomic profiles challenges the notion of therapeutic inhibition of a pathway as an alternative to inhibition of the target itself. These data will facilitate the discovery of therapeutic and diagnostic target candidates, the validation of research and clinical observations and the generation of unanticipated hypotheses that can advance our molecular understanding of this lethal cancer.

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Published In

Cell

DOI

EISSN

1097-4172

Publication Date

October 10, 2013

Volume

155

Issue

2

Start / End Page

462 / 477

Location

United States

Related Subject Headings

  • Signal Transduction
  • Proteome
  • Mutation
  • Male
  • Humans
  • Glioblastoma
  • Gene Regulatory Networks
  • Gene Expression Profiling
  • Female
  • Developmental Biology
 

Citation

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Brennan, C. W., Verhaak, R. G. W., McKenna, A., Campos, B., Noushmehr, H., Salama, S. R., … TCGA Research Network. (2013). The somatic genomic landscape of glioblastoma. Cell, 155(2), 462–477. https://doi.org/10.1016/j.cell.2013.09.034
Brennan, Cameron W., Roel G. W. Verhaak, Aaron McKenna, Benito Campos, Houtan Noushmehr, Sofie R. Salama, Siyuan Zheng, et al. “The somatic genomic landscape of glioblastoma.Cell 155, no. 2 (October 10, 2013): 462–77. https://doi.org/10.1016/j.cell.2013.09.034.
Brennan CW, Verhaak RGW, McKenna A, Campos B, Noushmehr H, Salama SR, et al. The somatic genomic landscape of glioblastoma. Cell. 2013 Oct 10;155(2):462–77.
Brennan, Cameron W., et al. “The somatic genomic landscape of glioblastoma.Cell, vol. 155, no. 2, Oct. 2013, pp. 462–77. Pubmed, doi:10.1016/j.cell.2013.09.034.
Brennan CW, Verhaak RGW, McKenna A, Campos B, Noushmehr H, Salama SR, Zheng S, Chakravarty D, Sanborn JZ, Berman SH, Beroukhim R, Bernard B, Wu C-J, Genovese G, Shmulevich I, Barnholtz-Sloan J, Zou L, Vegesna R, Shukla SA, Ciriello G, Yung WK, Zhang W, Sougnez C, Mikkelsen T, Aldape K, Bigner DD, Van Meir EG, Prados M, Sloan A, Black KL, Eschbacher J, Finocchiaro G, Friedman W, Andrews DW, Guha A, Iacocca M, O’Neill BP, Foltz G, Myers J, Weisenberger DJ, Penny R, Kucherlapati R, Perou CM, Hayes DN, Gibbs R, Marra M, Mills GB, Lander E, Spellman P, Wilson R, Sander C, Weinstein J, Meyerson M, Gabriel S, Laird PW, Haussler D, Getz G, Chin L, TCGA Research Network. The somatic genomic landscape of glioblastoma. Cell. 2013 Oct 10;155(2):462–477.
Journal cover image

Published In

Cell

DOI

EISSN

1097-4172

Publication Date

October 10, 2013

Volume

155

Issue

2

Start / End Page

462 / 477

Location

United States

Related Subject Headings

  • Signal Transduction
  • Proteome
  • Mutation
  • Male
  • Humans
  • Glioblastoma
  • Gene Regulatory Networks
  • Gene Expression Profiling
  • Female
  • Developmental Biology