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Deep learning-based single-shot prediction of differential effects of anti-VEGF treatment in patients with diabetic macular edema.

Publication ,  Journal Article
Rasti, R; Allingham, MJ; Mettu, PS; Kavusi, S; Govind, K; Cousins, SW; Farsiu, S
Published in: Biomed Opt Express
February 1, 2020

Anti-vascular endothelial growth factor (VEGF) agents are widely regarded as the first line of therapy for diabetic macular edema (DME) but are not universally effective. An automatic method that can predict whether a patient is likely to respond to anti-VEGF therapy can avoid unnecessary trial and error treatment strategies and promote the selection of more effective first-line therapies. The objective of this study is to automatically predict the efficacy of anti-VEGF treatment of DME in individual patients based on optical coherence tomography (OCT) images. We performed a retrospective study of 127 subjects treated for DME with three consecutive injections of anti-VEGF agents. Patients' retinas were imaged using spectral-domain OCT (SD-OCT) before and after anti-VEGF therapy, and the total retinal thicknesses before and after treatment were extracted from OCT B-scans. A novel deep convolutional neural network was designed and evaluated using pre-treatment OCT scans as input and differential retinal thickness as output, with 5-fold cross-validation. The group of patients responsive to anti-VEGF treatment was defined as those with at least a 10% reduction in retinal thickness following treatment. The predictive performance of the system was evaluated by calculating the precision, sensitivity, specificity, and area under the receiver operating characteristic curve (AUC). The algorithm achieved an average AUC of 0.866 in discriminating responsive from non-responsive patients, with an average precision, sensitivity, and specificity of 85.5%, 80.1%, and 85.0%, respectively. Classification precision was significantly higher when differentiating between very responsive and very unresponsive patients. The proposed automatic algorithm accurately predicts the response to anti-VEGF treatment in DME patients based on OCT images. This pilot study is a critical step toward using non-invasive imaging and automated analysis to select the most effective therapy for a patient's specific disease condition.

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Published In

Biomed Opt Express

DOI

ISSN

2156-7085

Publication Date

February 1, 2020

Volume

11

Issue

2

Start / End Page

1139 / 1152

Location

United States

Related Subject Headings

  • 5102 Atomic, molecular and optical physics
  • 4003 Biomedical engineering
  • 3212 Ophthalmology and optometry
  • 0912 Materials Engineering
  • 0205 Optical Physics
 

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Rasti, R., Allingham, M. J., Mettu, P. S., Kavusi, S., Govind, K., Cousins, S. W., & Farsiu, S. (2020). Deep learning-based single-shot prediction of differential effects of anti-VEGF treatment in patients with diabetic macular edema. Biomed Opt Express, 11(2), 1139–1152. https://doi.org/10.1364/BOE.379150
Rasti, Reza, Michael J. Allingham, Priyatham S. Mettu, Sam Kavusi, Kishan Govind, Scott W. Cousins, and Sina Farsiu. “Deep learning-based single-shot prediction of differential effects of anti-VEGF treatment in patients with diabetic macular edema.Biomed Opt Express 11, no. 2 (February 1, 2020): 1139–52. https://doi.org/10.1364/BOE.379150.
Rasti R, Allingham MJ, Mettu PS, Kavusi S, Govind K, Cousins SW, et al. Deep learning-based single-shot prediction of differential effects of anti-VEGF treatment in patients with diabetic macular edema. Biomed Opt Express. 2020 Feb 1;11(2):1139–52.
Rasti, Reza, et al. “Deep learning-based single-shot prediction of differential effects of anti-VEGF treatment in patients with diabetic macular edema.Biomed Opt Express, vol. 11, no. 2, Feb. 2020, pp. 1139–52. Pubmed, doi:10.1364/BOE.379150.
Rasti R, Allingham MJ, Mettu PS, Kavusi S, Govind K, Cousins SW, Farsiu S. Deep learning-based single-shot prediction of differential effects of anti-VEGF treatment in patients with diabetic macular edema. Biomed Opt Express. 2020 Feb 1;11(2):1139–1152.
Journal cover image

Published In

Biomed Opt Express

DOI

ISSN

2156-7085

Publication Date

February 1, 2020

Volume

11

Issue

2

Start / End Page

1139 / 1152

Location

United States

Related Subject Headings

  • 5102 Atomic, molecular and optical physics
  • 4003 Biomedical engineering
  • 3212 Ophthalmology and optometry
  • 0912 Materials Engineering
  • 0205 Optical Physics