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RNA-programmable cell-type monitoring and manipulation in the human cortex with CellREADR.

Publication ,  Journal Article
Matthews, EA; Russ, JB; Qian, Y; Zhao, S; Thompson, P; Methani, M; Vestal, M; Huang, ZJ; Southwell, D
Published in: Cell Rep
August 26, 2025

Reliable and systematic access to diverse cell types is necessary for understanding the organization, function, and pathophysiology of human neural circuits. Methods for targeting human neural populations are scarce and currently center on identifying transcriptional enhancers and engineering viral capsids. Here, we demonstrate the utility of cell access through RNA sensing by endogenous adenosine deaminase acting on RNA (ADAR) (CellREADR), a programmable RNA sensor-effector technology that couples cellular RNA sensing to effector protein translation, for accessing, monitoring, and manipulating specific neuron types in the human cortex ex vivo. We design CellREADRs to target two subpopulations-calretinin (CALB2) GABAergic interneurons and forkhead box protein P2 (FOXP2) glutamatergic projection neurons-and then validate targeting specificity using histological, electrophysiological, and transcriptomic methods. CellREADR expression of channelrhodopsin and GCamp enables the manipulation and monitoring of these populations in live cortical microcircuits. By demonstrating specific, reliable, and programmable experimental access to human neuronal subpopulations, our results highlight CellREADR's potential for studying neural circuits and treating brain disorders.

Duke Scholars

Published In

Cell Rep

DOI

EISSN

2211-1247

Publication Date

August 26, 2025

Volume

44

Issue

8

Start / End Page

116037

Location

United States

Related Subject Headings

  • RNA
  • Neurons
  • Male
  • Interneurons
  • Humans
  • Cerebral Cortex
  • Adenosine Deaminase
  • 31 Biological sciences
  • 1116 Medical Physiology
  • 0601 Biochemistry and Cell Biology
 

Citation

APA
Chicago
ICMJE
MLA
NLM
Matthews, E. A., Russ, J. B., Qian, Y., Zhao, S., Thompson, P., Methani, M., … Southwell, D. (2025). RNA-programmable cell-type monitoring and manipulation in the human cortex with CellREADR. Cell Rep, 44(8), 116037. https://doi.org/10.1016/j.celrep.2025.116037
Matthews, Elizabeth A., Jeffrey B. Russ, Yongjun Qian, Shengli Zhao, Peyton Thompson, Muhib Methani, Matthew Vestal, Z Josh Huang, and Derek Southwell. “RNA-programmable cell-type monitoring and manipulation in the human cortex with CellREADR.Cell Rep 44, no. 8 (August 26, 2025): 116037. https://doi.org/10.1016/j.celrep.2025.116037.
Matthews EA, Russ JB, Qian Y, Zhao S, Thompson P, Methani M, et al. RNA-programmable cell-type monitoring and manipulation in the human cortex with CellREADR. Cell Rep. 2025 Aug 26;44(8):116037.
Matthews, Elizabeth A., et al. “RNA-programmable cell-type monitoring and manipulation in the human cortex with CellREADR.Cell Rep, vol. 44, no. 8, Aug. 2025, p. 116037. Pubmed, doi:10.1016/j.celrep.2025.116037.
Matthews EA, Russ JB, Qian Y, Zhao S, Thompson P, Methani M, Vestal M, Huang ZJ, Southwell D. RNA-programmable cell-type monitoring and manipulation in the human cortex with CellREADR. Cell Rep. 2025 Aug 26;44(8):116037.
Journal cover image

Published In

Cell Rep

DOI

EISSN

2211-1247

Publication Date

August 26, 2025

Volume

44

Issue

8

Start / End Page

116037

Location

United States

Related Subject Headings

  • RNA
  • Neurons
  • Male
  • Interneurons
  • Humans
  • Cerebral Cortex
  • Adenosine Deaminase
  • 31 Biological sciences
  • 1116 Medical Physiology
  • 0601 Biochemistry and Cell Biology