Simon Gray Gregory | Scholars@Duke

Simon Gray Gregory
Professor in Neurology

My principal area of research involves elucidating the molecular mechanisms underlying multi-factorial diseases. My lab is primarily interested identifying the complex genetic factors that give rise to multiple sclerosis, autism and cardiovascular disease. We are using targeted approaches to identify differential methylation of the oxytocin receptor gene (OXTR) in individuals with autism, and applying these data to an NICHD funded ACE award, SOARS-B, to assess long term use of oxytocin nasal spray to improve social reciprocity in 300 children with autism, and for which we are developing e/genetic and transcriptomic predictors of response and effects of long term drug exposure. My MS laboratories at Duke University and the David H Murdock Research Institute (DHMRI) are using cell signaling and immune cell flow sorting to establish the role of IL7R signaling in the development of MS; we have developed three novel mouse strains to induce EAE susceptibility and to investigate allele and splicing specific effects of IL7R in these novel MS models; I am PI of the MURDOCK-MS collection, a cross sectional MS cohort of ~1000 MS patients that will provide the basis for genetic, genomic and metabolomic biomarker identification of MS disease development and progression. I am also Director of the nascent Duke Center for Research in Autoimmunity and MS within the Duke Department of Neurology.

Current Research Interests

Multiple Sclerosis

Autism

Coronary Artery Disease

Prostate and Lung cancer

Epigenetics of human disease

Application of single cell technologies to basic and translational research

Precision medicine of neurological disease

Current Appointments & Affiliations

Professor in Neurology, Neurology, MS & Neuroimmunology, Neurology 2016
Research Professor in Molecular Genetics and Microbiology, Molecular Genetics and Microbiology, Basic Science Departments 2016
Member of the Duke Cancer Institute, Duke Cancer Institute, Institutes and Centers 2003
Member of Duke Molecular Physiology Institute, Duke Molecular Physiology Institute, Duke Molecular Physiology Institute 2013

Contact Information

300 N. Duke Street, Room 51-102, Duke Molecular Physiology Institute, Durham, NC 27701
Duke Box 104775, Durham, NC 27701
simon.gregory@duke.edu (919) 684-0726
https://dmpi.duke.edu/faculty/simon-gregory-phd
https://genome.duke.edu/directory/cbb-faculty/simon-gregory-phd

Background
Education, Training, & Certifications
- Ph.D., Open University, Milton Keynes (U.K.) 2003
- B.A.Sc., RMIT University (Australia) 1990
Duke Appointment History
- Professor - TrackV of Medicine, Medicine, Medical Genetics, Medicine 2016
- Associate Research Professor in Molecular Genetics and Microbiology, Molecular Genetics and Microbiology, Basic Science Departments 2010 - 2016
- Associate Professor in Medicine, Medicine, Medical Genetics, Medicine 2013 - 2016
- Associate Professor in Medicine, Duke Molecular Physiology Institute, Duke Molecular Physiology Institute 2010 - 2013
- Assistant Professor in Medicine, Duke Molecular Physiology Institute, Duke Molecular Physiology Institute 2006 - 2010
- Assistant Research Professor in Medicine, Duke Molecular Physiology Institute, Duke Molecular Physiology Institute 2004 - 2006
Academic Positions Outside Duke
- Adjunct Graduate Faculty, Department of Biological and Biomedical Sciences, North Carolina Central University. 2018 - 2019
Recognition
In the News
- MAR 23, 2017 Duke Health News
  
  New Gene Interaction Appears to be Associated with Increased MS Risk
- NOV 7, 2016
  
  Mapping the Biology of Drug-Resistant Multiple Sclerosis
- JUN 26, 2015
  
  Allen Song Named Interim Director of Brain Institute
- JUN 11, 2015 NPR
  
  Simon Gregory quoted: More evidence that parents' ages could influence autism risk
- NOV 21, 2014
  
  Simon Gregory Inducted to MS Hall of Fame
- SEP 25, 2013 WRAL
  
  Community comes together for 9-year-old with rare condition
- AUG 13, 2013 CNN
  
  Autism linked to induced or augmented labor, study says
- AUG 13, 2013 BBC News
  
  Induced labor 'linked to autism'
- AUG 13, 2013
  
  Inducing and Augmenting Labor May be Associated with Increased Risk of Autism
- AUG 13, 2013 Wall Street Journal
  
  Study finds link between induced labor and autism diagnoses
Awards & Honors
Research
Selected Grants
- The role of gastrin in esophageal submucosal gland acinar ductal metaplasia awarded by National Institutes of Health 2018 - 2023
- Social Relationship Qualities as Predictors of Health & Aging from Adolescence thru Midlife awarded by University of Virginia - Charlottesville 2018 - 2023
- Dynamic Control of Innate Antiviral Immunity in Skin Homeostasis and Inflammation awarded by National Institutes of Health 2018 - 2023
- Postdoctoral Training in Genomic Medicine Research awarded by National Institutes of Health 2017 - 2022
- Copper Homeostasis in Mammals awarded by National Institutes of Health 2004 - 2022
- Characterizing the (epi)genetics of oxytocin response in clinical and animal models awarded by National Institutes of Health 2017 - 2022
- Bioinformatics and Computational Biology Training Program awarded by National Institutes of Health 2005 - 2021
- Transfusion Medicine and Hematology awarded by National Institutes of Health 1975 - 2021
- Genetics Training Grant awarded by National Institutes of Health 1979 - 2020
- Epigenomics in insulin resistance associated overactive bladder awarded by National Institutes of Health 2017 - 2020
- Networks of nutritional stress in human pancreatic islet cells awarded by Merck Sharp & Dohme 2018 - 2019
- Specific and Pervasive Symptoms in Adults with Multiple Sclerosis Using the MURDOCK-MS Dataset: A Secondary Analysis awarded by National Institutes of Health 2017 - 2019
- Development of Circulating Molecular Predictors of Chemotherapy and Novel Hormonal Therapy Benefit in Men with Metastatic Castration Resistant Prostate Cancer (mCRPC) awarded by Prostate Cancer Foundation 2014 - 2019
- Development of a Prognostic Marker for Lung Cancer Using Analysis of Tumor Evolution awarded by Department of Defense 2015 - 2019
- Systems Biology Approaches for Predicting Cardiometabolic Risk in Persons Living with HIV awarded by National Institutes of Health 2015 - 2018
- Identifying Genetic and Epigenetic Signatures of Treatment Response to Oxytocin in Humans and Mice awarded by Autism Speaks 2016 - 2018
- SOARS-B awarded by National Institutes of Health 2012 - 2018
- Integration of CT imaging features with cell-free plasma DNA as biomarkers for early lung cancer detection in patients with indeterminate pulmonary nodules awarded by Society of Thoracic Radiology 2016 - 2018
- SRA for Stephanie Arvai awarded by University of Texas Medical Branch 2016
- Research Training In Neuro-Oncology awarded by National Institutes of Health 1998 - 2016
- Metabolomic Quantitative Trait Locus (mQTL) Genetic Mapping in Human CVD awarded by National Institutes of Health 2009 - 2016
- A role for pathogen-induced IL-10 production in susceptibility to MS awarded by National Multiple Sclerosis Society 2014 - 2015
- Study of Oxytocin in Autism to improve Reciprocal Social Behaviors (SOARS-B) awarded by University of North Carolina - Chapel Hill 2012 - 2015
- Defining the Functional Role of a Novel MS Susceptibility Gene, IL7R alpha chain awarded by National Institutes of Health 2009 - 2015
- Linkage and candidate gene analysis in non-syndromic Chiari type I awarded by National Institutes of Health 2009 - 2015
- Study of Genetic Basis of Fuchs Corneal Dystrophy awarded by National Institutes of Health 2007 - 2013
- Genetic Mediators of Metabolic Cardiovascular Disease Risk awarded by National Institutes of Health 2009 - 2012
- Candidate Genes and Longitudinal Disability Phenotypes awarded by National Institutes of Health 2006 - 2012
- Molecular mechanisms of altered calcium sensing in human parathyroid disease awarded by National Institutes of Health 2010 - 2012
- Research Training In Neuro-Oncology awarded by National Institutes of Health 2005 - 2010
- Hereditary basis of neural tube defects awarded by National Institutes of Health 1999 - 2010
- Genotyping - Illumina Methylation Analysis of DNA Samples awarded by National Institute of Environmental Health Sciences 2008 - 2010
- Genotyping - Methlylation Infinium Chips awarded by National Institute of Environmental Health Sciences 2008 - 2010
- Molecular Dissection of Cardiovascular Disease: From Genes to Models to Function awarded by National Institutes of Health 2007 - 2009
- GENECARD: Gene identification in Early-Onset CAD awarded by National Institutes of Health 2003 - 2009
- Molecular Genetics of Coronary Artery Disease awarded by National Institutes of Health 2006 - 2007
- High-Resolution CGH Characterization of Brain Tumors awarded by National Institutes of Health 2004 - 2006
Publications & Artistic Works
Selected Publications
- Academic Articles
  - Perkeybile, AM, Carter, CS, Wroblewski, KL, Puglia, MH, Kenkel, WM, Lillard, TS, Karaoli, T, Gregory, SG, Mohammadi, N, Epstein, L, Bales, KL, and Connelly, JJ. "Early nurture epigenetically tunes the oxytocin receptor." Psychoneuroendocrinology 99 (January 2019): 128-136. Full Text
  - Ward-Caviness, CK, Kraus, WE, Blach, C, Haynes, CS, Dowdy, E, Miranda, ML, Devlin, R, Diaz-Sanchez, D, Cascio, WE, Mukerjee, S, Stallings, C, Smith, LA, Gregory, SG, Shah, SH, Neas, LM, and Hauser, ER. "Associations Between Residential Proximity to Traffic and Vascular Disease in a Cardiac Catheterization Cohort." Arteriosclerosis, Thrombosis, and Vascular Biology 38, no. 1 (January 2018): 275-282. Full Text
  - Kanayama, M, Xu, S, Danzaki, K, Gibson, JR, Inoue, M, Gregory, SG, and Shinohara, ML. "Skewing of the population balance of lymphoid and myeloid cells by secreted and intracellular osteopontin." Nature Immunology 18, no. 9 (September 2017): 973-984. Full Text Open Access Copy
  - Wang, A, Kwee, LC, Grass, E, Neely, ML, Gregory, SG, Fox, KAA, Armstrong, PW, White, HD, Ohman, EM, Roe, MT, Shah, SH, and Chan, MY. "Whole blood sequencing reveals circulating microRNA associations with high-risk traits in non-ST-segment elevation acute coronary syndrome." Atherosclerosis 261 (June 2017): 19-25. Full Text
  - Afshari, NA, Igo, RP, Morris, NJ, Stambolian, D, Sharma, S, Pulagam, VL, Dunn, S, Stamler, JF, Truitt, BJ, Rimmler, J, Kuot, A, Croasdale, CR, Qin, X, Burdon, KP, Riazuddin, SA, Mills, R, Klebe, S, Minear, MA, Zhao, J, Balajonda, E, Rosenwasser, GO, Baratz, KH, Mootha, VV, Patel, SV, Gregory, SG, Bailey-Wilson, JE, Price, MO, Price, FW, Craig, JE, Fingert, JH, Gottsch, JD, Aldave, AJ, Klintworth, GK, Lass, JH, Li, Y-J, and Iyengar, SK. "Genome-wide association study identifies three novel loci in Fuchs endothelial corneal dystrophy." Nature Communications 8 (March 30, 2017): 14898-null. Full Text
  - Galarza-Muñoz, G, Briggs, FBS, Evsyukova, I, Schott-Lerner, G, Kennedy, EM, Nyanhete, T, Wang, L, Bergamaschi, L, Widen, SG, Tomaras, GD, Ko, DC, Bradrick, SS, Barcellos, LF, Gregory, SG, and Garcia-Blanco, MA. "Human Epistatic Interaction Controls IL7R Splicing and Increases Multiple Sclerosis Risk." Cell 169, no. 1 (March 2017): 72-84.e13. Full Text
  - Gupta, S, Li, J, Kemeny, G, Bitting, RL, Beaver, J, Somarelli, JA, Ware, KE, Gregory, S, and Armstrong, AJ. "Whole Genomic Copy Number Alterations in Circulating Tumor Cells from Men with Abiraterone or Enzalutamide-Resistant Metastatic Castration-Resistant Prostate Cancer." Clinical Cancer Research : an Official Journal of the American Association for Cancer Research 23, no. 5 (March 2017): 1346-1357. Full Text
  - Ward-Caviness, CK, Neas, LM, Blach, C, Haynes, CS, LaRocque-Abramson, K, Grass, E, Dowdy, ZE, Devlin, RB, Diaz-Sanchez, D, Cascio, WE, Miranda, ML, Gregory, SG, Shah, SH, Kraus, WE, and Hauser, ER. "A genome-wide trans-ethnic interaction study links the PIGR-FCAMR locus to coronary atherosclerosis via interactions between genetic variants and residential exposure to traffic." Plos One 12, no. 3 (January 2017): e0173880-null. Full Text
  - Inoue, M, Chen, P-H, Siecinski, S, Li, Q-J, Liu, C, Steinman, L, Gregory, SG, Benner, E, and Shinohara, ML. "An interferon-β-resistant and NLRP3 inflammasome-independent subtype of EAE with neuronal damage." Nature Neuroscience 19, no. 12 (December 2016): 1599-1609. Full Text
  - Sullivan, LL, Maloney, KA, Towers, AJ, Gregory, SG, and Sullivan, BA. "Human centromere repositioning within euchromatin after partial chromosome deletion." Chromosome Research : an International Journal on the Molecular, Supramolecular and Evolutionary Aspects of Chromosome Biology 24, no. 4 (December 2016): 451-466. Full Text
  - Zeng, Y, Chen, H, Ni, T, Ruan, R, Nie, C, Liu, X, Feng, L, Zhang, F, Lu, J, Li, J, Li, Y, Tao, W, Gregory, SG, Gottschalk, W, Lutz, MW, Land, KC, Yashin, A, Tan, Q, Yang, Z, Bolund, L, Ming, Q, Yang, H, Min, J, Willcox, DC, Willcox, BJ, Gu, J, Hauser, E, Tian, X-L, and Vaupel, JW. "Interaction Between the FOXO1A-209 Genotype and Tea Drinking Is Significantly Associated with Reduced Mortality at Advanced Ages." Rejuvenation Research 19, no. 3 (June 2016): 195-203. Full Text Open Access Copy
  - Zeng, Y, Nie, C, Min, J, Liu, X, Li, M, Chen, H, Xu, H, Wang, M, Ni, T, Li, Y, Yan, H, Zhang, J-P, Song, C, Chi, L-Q, Wang, H-M, Dong, J, Zheng, G-Y, Lin, L, Qian, F, Qi, Y, Liu, X, Cao, H, Wang, Y, Zhang, L, Li, Z, Zhou, Y, Wang, Y, Lu, J, Li, J, Qi, M, Bolund, L, Yashin, A, Land, KC, Gregory, S, Yang, Z, Gottschalk, W, Tao, W, Wang, J, Wang, J, Xu, X, Bae, H, Nygaard, M, Christiansen, L, Christensen, K, Franceschi, C, Lutz, MW, Gu, J, Tan, Q, Perls, T, Sebastiani, P, Deelen, J, Slagboom, E, Hauser, E, Xu, H, Tian, X-L, Yang, H, and Vaupel, JW. "Novel loci and pathways significantly associated with longevity." Scientific Reports 6 (February 25, 2016): 21243-null. Full Text Open Access Copy
  - Dungan, JR, Qin, X, Horne, BD, Carlquist, JF, Singh, A, Hurdle, M, Grass, E, Haynes, C, Gregory, SG, Shah, SH, Hauser, ER, and Kraus, WE. "Case-Only Survival Analysis Reveals Unique Effects of Genotype, Sex, and Coronary Disease Severity on Survivorship." Plos One 11, no. 5 (January 2016): e0154856-null. Full Text
  - Ward-Caviness, CK, Neas, LM, Blach, C, Haynes, CS, LaRocque-Abramson, K, Grass, E, Dowdy, E, Devlin, RB, Diaz-Sanchez, D, Cascio, WE, Lynn Miranda, M, Gregory, SG, Shah, SH, Kraus, WE, and Hauser, ER. "Genetic Variants in the Bone Morphogenic Protein Gene Family Modify the Association between Residential Exposure to Traffic and Peripheral Arterial Disease." Plos One 11, no. 4 (January 2016): e0152670-null. Full Text
  - Kraus, WE, Muoio, DM, Stevens, R, Craig, D, Bain, JR, Grass, E, Haynes, C, Kwee, L, Qin, X, Slentz, DH, Krupp, D, Muehlbauer, M, Hauser, ER, Gregory, SG, Newgard, CB, and Shah, SH. "Metabolomic Quantitative Trait Loci (mQTL) Mapping Implicates the Ubiquitin Proteasome System in Cardiovascular Disease Pathogenesis." Plos Genetics 11, no. 11 (November 5, 2015): e1005553-null. Full Text Open Access Copy
  - Riley, RT, Torres, O, Matute, J, Gregory, SG, Ashley-Koch, AE, Showker, JL, Mitchell, T, Voss, KA, Maddox, JR, and Gelineau-van Waes, JB. "Evidence for fumonisin inhibition of ceramide synthase in humans consuming maize-based foods and living in high exposure communities in Guatemala." Molecular Nutrition & Food Research 59, no. 11 (November 2015): 2209-2224. Full Text
  - Ward-Caviness, CK, Kraus, WE, Blach, C, Haynes, CS, Dowdy, E, Miranda, ML, Devlin, RB, Diaz-Sanchez, D, Cascio, WE, Mukerjee, S, Stallings, C, Smith, LA, Gregory, SG, Shah, SH, Hauser, ER, and Neas, LM. "Association of Roadway Proximity with Fasting Plasma Glucose and Metabolic Risk Factors for Cardiovascular Disease in a Cross-Sectional Study of Cardiac Catheterization Patients." Environmental Health Perspectives 123, no. 10 (October 2015): 1007-1014. Full Text
  - Shah, AA, Gregory, SG, Krupp, D, Feng, S, Dorogi, A, Haynes, C, Grass, E, Lin, SS, Hauser, ER, Kraus, WE, Shah, SH, and Hughes, GC. "Epigenetic profiling identifies novel genes for ascending aortic aneurysm formation with bicuspid aortic valves." The heart surgery forum 18, no. 4 (August 30, 2015): E134-E139. Full Text
  - Cope, H, Garrett, ME, Gregory, S, and Ashley-Koch, A. "Pregnancy continuation and organizational religious activity following prenatal diagnosis of a lethal fetal defect are associated with improved psychological outcome." Prenatal diagnosis 35, no. 8 (August 2015): 761-768. Full Text
  - Riley, RT, Showker, JL, Lee, CM, Zipperer, CE, Mitchell, TR, Voss, KA, Zitomer, NC, Torres, O, Matute, J, Gregory, SG, Ashley-Koch, AE, Maddox, JR, Gardner, N, and Gelineau-Van Waes, JB. "A blood spot method for detecting fumonisin-induced changes in putative sphingolipid biomarkers in LM/Bc mice and humans." Food Additives and Contaminants Part a Chemistry, Analysis, Control, Exposure and Risk Assessment 32, no. 6 (June 3, 2015): 934-949. Full Text
  - Roberson, EC, Dowdle, WE, Ozanturk, A, Garcia-Gonzalo, FR, Li, C, Halbritter, J, Elkhartoufi, N, Porath, JD, Cope, H, Ashley-Koch, A, Gregory, S, Thomas, S, Sayer, JA, Saunier, S, Otto, EA, Katsanis, N, Davis, EE, Attié-Bitach, T, Hildebrandt, F, Leroux, MR, and Reiter, JF. "TMEM231, mutated in orofaciodigital and Meckel syndromes, organizes the ciliary transition zone." The Journal of Cell Biology 209, no. 1 (April 2015): 129-142. Full Text
  - Winnike, JH, Wei, X, Knagge, KJ, Colman, SD, Gregory, SG, and Zhang, X. "Comparison of GC-MS and GC×GC-MS in the analysis of human serum samples for biomarker discovery." Journal of Proteome Research 14, no. 4 (April 2015): 1810-1817. Full Text
  - Shah, AA, Haynes, C, Craig, DM, Sebek, J, Grass, E, Abramson, K, Hauser, E, Gregory, SG, Kraus, WE, Smith, PK, and Shah, SH. "Genetic variants associated with vein graft stenosis after coronary artery bypass grafting." The Heart Surgery Forum 18, no. 1 (February 27, 2015): E1-E5. Full Text
  - Lock, EF, Soldano, KL, Garrett, ME, Cope, H, Markunas, CA, Fuchs, H, Grant, G, Dunson, DB, Gregory, SG, and Ashley-Koch, AE. "Joint eQTL assessment of whole blood and dura mater tissue from individuals with Chiari type I malformation." Bmc Genomics 16 (January 22, 2015): 11-null. Full Text Open Access Copy
  - Li, J, Gregory, SG, Garcia-Blanco, MA, and Armstrong, AJ. "Using circulating tumor cells to inform on prostate cancer biology and clinical utility." Critical reviews in clinical laboratory sciences 52, no. 4 (January 2015): 191-210. (Review) Full Text
  - Riley, RT, Showker, JL, Lee, CM, Zipperer, CE, Mitchell, TR, Voss, KA, Zitomer, NC, Torres, O, Matute, J, Gregory, SG, Ashley-Koch, AE, Maddox, JR, Gardner, N, and Gelineau-Van Waes, JB. "A blood spot method for detecting fumonisin-induced changes in putative sphingolipid biomarkers in LM/Bc mice and humans." Food additives & contaminants. Part A, Chemistry, analysis, control, exposure & risk assessment 32, no. 6 (January 2015): 934-949. Full Text
  - Torres, O, Matute, J, Gelineau-Van Waes, J, Maddox, JR, Gregory, SG, Ashley-Koch, AE, Showker, JL, Voss, KA, and Riley, RT. "Human health implications from co-exposure to aflatoxins and fumonisins in maize-based foods in Latin America: Guatemala as a case study." World Mycotoxin Journal 8, no. 2 (January 1, 2015): 143-159. (Review) Full Text
  - Krupp, DR, Soldano, KL, Garrett, ME, Cope, H, Ashley-Koch, AE, and Gregory, SG. "Missing genetic risk in neural tube defects: can exome sequencing yield an insight?." Birth defects research. Part A, Clinical and molecular teratology 100, no. 8 (August 2014): 642-646. Full Text
  - Markunas, CA, Lock, E, Soldano, K, Cope, H, Ding, C-KC, Enterline, DS, Grant, G, Fuchs, H, Ashley-Koch, AE, and Gregory, SG. "Identification of Chiari Type I Malformation subtypes using whole genome expression profiles and cranial base morphometrics." BMC medical genomics 7 (June 25, 2014): 39-. Full Text
  - Li, Y-J, Minear, MA, Qin, X, Rimmler, J, Hauser, MA, Allingham, RR, Igo, RP, Lass, JH, Iyengar, SK, Klintworth, GK, Afshari, NA, Gregory, SG, and FECD Genetics Consortium, . "Mitochondrial polymorphism A10398G and Haplogroup I are associated with Fuchs' endothelial corneal dystrophy." Investigative Ophthalmology & Visual Science 55, no. 7 (June 10, 2014): 4577-4584. Full Text
  - Miranda, ML, Anthopolos, R, and Gregory, SG. "Association of autism with induced or augmented childbirth." Am J Obstet Gynecol 210, no. 5 (May 2014): 492-493. (Letter) Full Text Link to Item
  - Torres, O, Matute, J, Gelineau-van Waes, J, Maddox, JR, Gregory, SG, Ashley-Koch, AE, Showker, JL, Zitomer, NC, Voss, KA, and Riley, RT. "Urinary fumonisin B1 and estimated fumonisin intake in women from high- and low-exposure communities in Guatemala." Mol Nutr Food Res 58, no. 5 (May 2014): 973-983. Full Text Link to Item
  - McGarrah, R, Craig, DM, Haynes, C, Hauser, E, Newgard, CB, Gregory, SG, Kraus, W, and Shah, S. "OMICS PROFILING HIGHLIGHTS ENDOPLASMIC RETICULUM-ASSOCIATED DEGRADATION AND UBIQUITIN PROTEASOME PATHWAYS IN INSULIN RESISTANCE AND GLYCEMIC CONTROL." Journal of the American College of Cardiology 63, no. 12 (April 2014): A1600-A1600. Full Text
  - Gregory, SG. "Genetic predisposition of behavioral response." Proceedings of the National Academy of Sciences of the United States of America 111, no. 5 (February 2014): 1672-1673. Full Text
  - Miranda, ML, Anthopolos, R, and Gregory, SG. "Induction or augmentation of labor and autism--reply." JAMA pediatrics 168, no. 2 (February 2014): 191-192. (Letter) Full Text
  - "Association of autism with induced or augmented childbirth." American Journal of Obstetrics and Gynecology 210, no. 5 (January 1, 2014): 492-493. (Letter) Full Text
  - Gregory, SG, Anthopolos, R, Osgood, CE, Grotegut, CA, and Miranda, ML. "Association of Autism With Induced or Augmented Childbirth in North Carolina Birth Record (1990–1998) and Education Research (1997–2007) Databases." Obstetrical & Gynecological Survey 69, no. 1 (January 2014): 7-9. Full Text
  - Krupp, DR, Soldano, KL, Garrett, ME, Cope, H, Ashley-Koch, AE, and Gregory, SG. "Missing genetic risk in neural tube defects: Can exome sequencing yield an insight?." Birth Defects Research Part a Clinical and Molecular Teratology 100, no. 8 (January 1, 2014): 642-646. Full Text
  - Markunas, CA, Enterline, DS, Dunlap, K, Soldano, K, Cope, H, Stajich, J, Grant, G, Fuchs, H, Gregory, SG, and Ashley-Koch, AE. "Genetic evaluation and application of posterior cranial fossa traits as endophenotypes for Chiari type I malformation." Ann Hum Genet 78, no. 1 (January 2014): 1-12. Full Text Link to Item
  - Connelly, JJ, Cherepanova, OA, Doss, JF, Karaoli, T, Lillard, TS, Markunas, CA, Nelson, S, Wang, T, Ellis, PD, Langford, CF, Haynes, C, Seo, DM, Goldschmidt-Clermont, PJ, Shah, SH, Kraus, WE, Hauser, ER, and Gregory, SG. "Epigenetic regulation of COL15A1 in smooth muscle cell replicative aging and atherosclerosis." Human Molecular Genetics 22, no. 25 (December 1, 2013): 5107-5120. Full Text
  - Ward-Caviness, C, Haynes, C, Blach, C, Dowdy, E, Gregory, SG, Shah, SH, Horne, BD, Kraus, WE, and Hauser, ER. "Gene-smoking interactions in multiple Rho-GTPase pathway genes in an early-onset coronary artery disease cohort." Human Genetics 132, no. 12 (December 1, 2013): 1371-1382. Full Text
  - Ward-Caviness, C, Haynes, C, Blach, C, Dowdy, E, Gregory, SG, Shah, SH, Horne, BD, Kraus, WE, and Hauser, ER. "Gene-smoking interactions in multiple Rho-GTPase pathway genes in an early-onset coronary artery disease cohort." Hum Genet 132, no. 12 (December 2013): 1371-1382. Full Text Link to Item
  - Gregory, SG, Anthopolos, R, Osgood, CE, Grotegut, CA, and Miranda, ML. "Association of autism with induced or augmented childbirth in North Carolina Birth Record (1990-1998) and Education Research (1997-2007) databases." JAMA Pediatr 167, no. 10 (October 2013): 959-966. Full Text Link to Item
  - Soldano, KL, Garrett, ME, Cope, HL, Rusnak, JM, Ellis, NJ, Dunlap, KL, Speer, MC, Gregory, SG, and Ashley-Koch, AE. "Genetic association analyses of nitric oxide synthase genes and neural tube defects vary by phenotype." Birth Defects Res B Dev Reprod Toxicol 98, no. 5 (October 2013): 365-373. Full Text Link to Item
  - Zeng, Y, Cheng, L, Zhao, L, Tan, Q, Feng, Q, Chen, H, Shen, K, Li, J, Zhang, F, Cao, H, Gregory, SG, Yang, Z, Gu, J, Tao, W, Tian, X-L, and Hauser, ER. "Interactions between Social/behavioral factors and ADRB2 genotypes may be associated with health at advanced ages in China." BMC GERIATRICS 13 (September 9, 2013). Full Text Open Access Copy Link to Item
  - Cope, H, McMahon, K, Heise, E, Eubanks, S, Garrett, M, Gregory, S, and Ashley-Koch, A. "Outcome and life satisfaction of adults with myelomeningocele." Disability and Health Journal (2013). Full Text
  - Cope, H, McMahon, K, Heise, E, Eubanks, S, Garrett, M, Gregory, S, and Ashley-Koch, A. "Outcome and life satisfaction of adults with myelomeningocele." Disability and Health Journal 6, no. 3 (2013): 236-243. Full Text
  - Evsyukova, I, Bradrick, SS, Gregory, SG, and Garcia-Blanco, MA. "Cleavage and polyadenylation specificity factor 1 (CPSF1) regulates alternative splicing of interleukin 7 receptor (IL7R) exon 6." RNA 19, no. 1 (January 2013): 103-115. Full Text Link to Item
  - Kennerly, E, Ballmann, A, Martin, S, Wolfinger, R, Gregory, S, Stoskopf, M, and Gibson, G. "A gene expression signature of confinement in peripheral blood of red wolves (Canis rufus)." Molecular Ecology 17, no. 11 (2013). Full Text
  - Markunas, CA, Soldano, K, Dunlap, K, Cope, H, Asiimwe, E, Stajich, J, Enterline, D, Grant, G, Fuchs, H, Gregory, SG, and Ashley-Koch, AE. "Stratified whole genome linkage analysis of Chiari type I malformation implicates known Klippel-Feil syndrome genes as putative disease candidates. (Published online)" PLoS One 8, no. 4 (2013): e61521-. Full Text Link to Item
  - Minear, MA, Li, Y-J, Rimmler, J, Balajonda, E, Watson, S, Allingham, RR, Hauser, MA, Klintworth, GK, Afshari, NA, and Gregory, SG. "Genetic screen of African Americans with Fuchs endothelial corneal dystrophy.(Published online)" Mol Vis 19 (2013): 2508-2516. Link to Item
  - Nolan, D, Kraus, WE, Hauser, E, Li, Y-J, Thompson, DK, Johnson, J, Chen, H-C, Nelson, S, Haynes, C, Gregory, SG, Kraus, VB, and Shah, SH. "Genome-wide linkage analysis of cardiovascular disease biomarkers in a large, multigenerational family. (Published online)" PLoS One 8, no. 8 (2013): e71779-. Full Text Open Access Copy Link to Item
  - Shah, SH, Feng, S, Grass, E, Haynes, C, Chryst-Ladd, M, Craig, D, Hauser, ER, Newgard, CB, Kraus, WE, and Gregory, SG. "Integration of Whole Genome Methylation with Metabolomics Identifies Novel Cardiovascular Disease Genes." CIRCULATION 126, no. 21 (November 20, 2012). Link to Item
  - Ward-Caviness, C, Neas, L, Haynes, C, Blach, C, Burns, E, LaRocque-Abramson, K, Dowdy, E, Casco, W, Devlin, R, Diaz-Sanchez, D, Kraus, WE, Shah, SH, Gregory, SG, Miranda, ML, and Hauser, ER. "Genetic Variants in the Bone Morphogenic Protein (BMP) Family of Genes Interact with Mobile Source Air Pollution to Increase Risk of Peripheral Arterial Disease." CIRCULATION 126, no. 21 (November 20, 2012). Link to Item
  - Krupp, DR, Xu, P-T, Thomas, S, Dellinger, A, Etchevers, HC, Vekemans, M, Gilbert, JR, Speer, MC, Ashley-Koch, AE, Gregory, SG, and National Birth Defects Prevention Study, . "Transcriptome profiling of genes involved in neural tube closure during human embryonic development using long serial analysis of gene expression (long-SAGE)." Birth Defects Res A Clin Mol Teratol 94, no. 9 (September 2012): 683-692. Full Text Link to Item
  - Riley, RT, Torres, O, Showker, JL, Zitomer, NC, Matute, J, Voss, KA, Gelineau-van Waes, J, Maddox, JR, Gregory, SG, and Ashley-Koch, AE. "The kinetics of urinary fumonisin B1 excretion in humans consuming maize-based diets." Mol Nutr Food Res 56, no. 9 (September 2012): 1445-1455. Full Text Link to Item
  - Markunas, CA, Tubbs, RS, Moftakhar, R, Ashley-Koch, AE, Gregory, SG, Oakes, WJ, Speer, MC, and Iskandar, BJ. "Clinical, radiological, and genetic similarities between patients with Chiari Type I and Type 0 malformations." Journal of Neurosurgery. Pediatrics 9, no. 4 (April 2012): 372-378. Full Text
  - Nolan, DK, Sutton, B, Haynes, C, Johnson, J, Sebek, J, Dowdy, E, Crosslin, D, Crossman, D, Sketch, MH, Granger, CB, Seo, D, Goldschmidt-Clermont, P, Kraus, WE, Gregory, SG, Hauser, ER, and Shah, SH. "Fine mapping of a linkage peak with integration of lipid traits identifies novel coronary artery disease genes on chromosome 5. (Published online)" BMC Genet 13 (February 27, 2012): 12-. Full Text Link to Item
  - Lin, N, Di, C, Bortoff, K, Fu, J, Truszkowski, P, Killela, P, Duncan, C, McLendon, R, Bigner, D, Gregory, S, and Adamson, DC. "Deletion or epigenetic silencing of AJAP1 on 1p36 in glioblastoma." Molecular Cancer Research : Mcr 10, no. 2 (February 2012): 208-217. Full Text
  - Hara, MR, Kovacs, JJ, Whalen, EJ, Rajagopal, S, Strachan, RT, Grant, W, Towers, AJ, Williams, B, Lam, CM, Xiao, K, Shenoy, SK, Gregory, SG, Ahn, S, Duckett, DR, and Lefkowitz, RJ. "A stress response pathway regulates DNA damage through β2-adrenoreceptors and β-arrestin-1." Nature 477, no. 7364 (August 21, 2011): 349-353. Full Text
  - Minear, MA, Crosslin, DR, Sutton, BS, Connelly, JJ, Nelson, SC, Gadson-Watson, S, Wang, T, Seo, D, Vance, JM, Sketch, MH, Haynes, C, Goldschmidt-Clermont, PJ, Shah, SH, Kraus, WE, Hauser, ER, and Gregory, SG. "Polymorphic variants in tenascin-C (TNC) are associated with atherosclerosis and coronary artery disease." Human Genetics 129, no. 6 (June 2011): 641-654. Full Text
  - Li, Y-J, Minear, MA, Rimmler, J, Zhao, B, Balajonda, E, Hauser, MA, Allingham, RR, Eghrari, AO, Riazuddin, SA, Katsanis, N, Gottsch, JD, Gregory, SG, Klintworth, GK, and Afshari, NA. "Replication of TCF4 through association and linkage studies in late-onset Fuchs endothelial corneal dystrophy." Plos One 6, no. 4 (April 20, 2011): e18044-null. Full Text
  - Sun, AY, Koontz, JI, Shah, SH, Piccini, JP, Nilsson, KR, Craig, D, Haynes, C, Gregory, SG, Hranitzky, PM, and Pitt, GS. "The S1103Y cardiac sodium channel variant is associated with implantable cardioverter-defibrillator events in blacks with heart failure and reduced ejection fraction." Circulation. Cardiovascular Genetics 4, no. 2 (April 15, 2011): 163-168. Full Text
  - Feng, J, Zhang, J, Liu, M, Wan, G, Qi, K, Zheng, C, Lv, Z, Hu, C, Zeng, Y, Gregory, SG, and Yang, Z. "Association of mtDNA haplogroup F with healthy longevity in the female Chuang population, China." Experimental Gerontology 46, no. 12 (2011): 987-993. Full Text
  - Jin, G, Cook, S, Cui, B, Chen, WC, Keir, ST, Killela, P, Di, C, Payne, CA, Gregory, SG, McLendon, R, Bigner, DD, and Yan, H. "HDMX regulates p53 activity and confers chemoresistance to 3-bis(2-chloroethyl)-1-nitrosourea." Neuro Oncol 12, no. 9 (September 2010): 956-966. Full Text Link to Item
  - Duncan, CG, Killela, PJ, Payne, CA, Lampson, B, Chen, WC, Liu, J, Solomon, D, Waldman, T, Towers, AJ, Gregory, SG, McDonald, KL, McLendon, RE, Bigner, DD, and Yan, H. "Integrated genomic analyses identify ERRFI1 and TACC3 as glioblastoma-targeted genes." Oncotarget 1, no. 4 (August 2010): 265-277. Full Text
  - Zhang, L, Connelly, JJ, Peppel, K, Brian, L, Shah, SH, Nelson, S, Crosslin, DR, Wang, T, Allen, A, Kraus, WE, Gregory, SG, Hauser, ER, and Freedman, NJ. "Aging-related atherosclerosis is exacerbated by arterial expression of tumor necrosis factor receptor-1: evidence from mouse models and human association studies." Hum Mol Genet 19, no. 14 (July 15, 2010): 2754-2766. Full Text Link to Item
  - Evsyukova, I, Somarelli, JA, Gregory, SG, and Garcia-Blanco, MA. "Alternative splicing in multiple sclerosis and other autoimmune diseases." RNA Biol 7, no. 4 (July 2010): 462-473. (Review) Open Access Copy Link to Item
  - Vogazianou, AP, Chan, R, Bäcklund, LM, Pearson, DM, Liu, L, Langford, CF, Gregory, SG, Collins, VP, and Ichimura, K. "Distinct patterns of 1p and 19q alterations identify subtypes of human gliomas that have different prognoses." Neuro Oncol 12, no. 7 (July 2010): 664-678. Full Text Link to Item
  - Fraser, HI, Dendrou, CA, Healy, B, Rainbow, DB, Howlett, S, Smink, LJ, Gregory, S, Steward, CA, Todd, JA, Peterson, LB, and Wicker, LS. "Nonobese diabetic congenic strain analysis of autoimmune diabetes reveals genetic complexity of the Idd18 locus and identifies Vav3 as a candidate gene." J Immunol 184, no. 9 (May 1, 2010): 5075-5084. Full Text Link to Item
  - Chen, H-C, Kraus, VB, Li, Y-J, Nelson, S, Haynes, C, Johnson, J, Stabler, T, Hauser, ER, Gregory, SG, Kraus, WE, and Shah, SH. "Genome-wide linkage analysis of quantitative biomarker traits of osteoarthritis in a large, multigenerational extended family." Arthritis Rheum 62, no. 3 (March 2010): 781-790. Full Text Link to Item
  - Riazuddin, SA, Zaghloul, NA, Al-Saif, A, Davey, L, Diplas, BH, Meadows, DN, Eghrari, AO, Minear, MA, Li, Y-J, Klintworth, GK, Afshari, N, Gregory, SG, Gottsch, JD, and Katsanis, N. "Missense mutations in TCF8 cause late-onset Fuchs corneal dystrophy and interact with FCD4 on chromosome 9p." American Journal of Human Genetics 86, no. 1 (January 2010): 45-53. Full Text
  - Gregory, SG, Connelly, JJ, Towers, AJ, Johnson, J, Biscocho, D, Markunas, CA, Lintas, C, Abramson, RK, Wright, HH, Ellis, P, Langford, CF, Worley, G, Delong, GR, Murphy, SK, Cuccaro, ML, Persico, A, and Pericak-Vance, MA. "Genomic and epigenetic evidence for oxytocin receptor deficiency in autism. (Published online)" BMC Med 7 (October 22, 2009): 62-. Full Text Link to Item
  - McCauley, JL, Zuvich, RL, Bradford, Y, Kenealy, SJ, Schnetz-Boutaud, N, Gregory, SG, Hauser, SL, Oksenberg, JR, Mortlock, DP, Pericak-Vance, MA, and Haines, JL. "Follow-up examination of linkage and association to chromosome 1q43 in multiple sclerosis." Genes and Immunity 10, no. 7 (October 2009): 624-630. Full Text
  - Wang, T, Furey, TS, Connelly, JJ, Ji, S, Nelson, S, Heber, S, Gregory, SG, and Hauser, ER. "A general integrative genomic feature transcription factor binding site prediction method applied to analysis of USF1 binding in cardiovascular disease." Hum Genomics 3, no. 3 (April 2009): 221-235. Link to Item
  - Afshari, NA, Li, Y-J, Pericak-Vance, MA, Gregory, S, and Klintworth, GK. "Genome-wide linkage scan in fuchs endothelial corneal dystrophy." Investigative Ophthalmology & Visual Science 50, no. 3 (March 2009): 1093-1097. Full Text
  - Crosslin, DR, Shah, SH, Nelson, SC, Haynes, CS, Connelly, JJ, Gadson, S, Goldschmidt-Clermont, PJ, Vance, JM, Rose, J, Granger, CB, Seo, D, Gregory, SG, Kraus, WE, and Hauser, ER. "Genetic effects in the leukotriene biosynthesis pathway and association with atherosclerosis." Hum Genet 125, no. 2 (March 2009): 217-229. Full Text Link to Item
  - Maier, LM, Lowe, CE, Cooper, J, Downes, K, Anderson, DE, Severson, C, Clark, PM, Healy, B, Walker, N, Aubin, C, Oksenberg, JR, Hauser, SL, Compston, A, Sawcer, S, International Multiple Sclerosis Genetics Consortium, , De Jager, PL, Wicker, LS, Todd, JA, and Hafler, DA. "IL2RA genetic heterogeneity in multiple sclerosis and type 1 diabetes susceptibility and soluble interleukin-2 receptor production." Plos Genetics 5, no. 1 (January 2, 2009): e1000322-null. Full Text
  - Shah, SH, Freedman, NJ, Zhang, L, Crosslin, DR, Stone, DH, Haynes, C, Johnson, J, Nelson, S, Wang, L, Connelly, JJ, Muehlbauer, M, Ginsburg, GS, Crossman, DC, Jones, CJH, Vance, J, Sketch, MH, Granger, CB, Newgard, CB, Gregory, SG, Goldschmidt-Clermont, PJ, Kraus, WE, and Hauser, ER. "Neuropeptide Y gene polymorphisms confer risk of early-onset atherosclerosis." Plos Genetics 5, no. 1 (January 2, 2009): e1000318-null. Full Text Open Access Copy
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  - Shah, SH, Hauser, ER, Crosslin, D, Wang, L, Haynes, C, Connelly, J, Nelson, S, Johnson, J, Gadson, S, Nelson, CL, Seo, D, Gregory, S, Kraus, WE, Granger, CB, Goldschmidt-Clermont, P, and Newby, LK. "ALOX5AP variants are associated with in-stent restenosis after percutaneous coronary intervention." Atherosclerosis 201, no. 1 (November 2008): 148-154. Full Text Link to Item
  - Goswami, R, Sutton, BS, Rouf, C, Nelson, S, Haynes, C, Johnson, J, Goldschmidt-Clermont, P, Seo, D, Kraus, WE, Hauser, ER, Gregory, SG, and Shah, SS. "Biliverdin Reductase Genetic Polymorphisms are Associated with Early-Onset Coronary Artery Disease In Two Datasets." CIRCULATION 118, no. 18 (October 28, 2008): S389-S390. Link to Item
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  - Wang, L, Hauser, ER, Shah, SH, Seo, D, Sivashanmugam, P, Exum, ST, Gregory, SG, Granger, CB, Haines, JL, Jones, CJH, Crossman, D, Haynes, C, Kraus, WE, Freedman, NJ, Pericak-Vance, MA, Goldschmidt-Clermont, PJ, and Vance, JM. "Polymorphisms of the tumor suppressor gene LSAMP are associated with left main coronary artery disease." Annals of Human Genetics 72, no. Pt 4 (July 3, 2008): 443-453. Full Text
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  - Sutton, BS, Crosslin, DR, Shah, SH, Nelson, SC, Bassil, A, Hale, AB, Haynes, C, Goldschmidt-Clermont, PJ, Vance, JM, Seo, D, Kraus, WE, Gregory, SG, and Hauser, ER. "Comprehensive genetic analysis of the platelet activating factor acetylhydrolase (PLA2G7) gene and cardiovascular disease in case-control and family datasets." Hum Mol Genet 17, no. 9 (May 1, 2008): 1318-1328. Full Text Link to Item
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  - Gregory, SG, Schmidt, S, Seth, P, Oksenberg, JR, Hart, J, Prokop, A, Caillier, SJ, Ban, M, Goris, A, Barcellos, LF, Lincoln, R, McCauley, JL, Sawcer, SJ, Compston, DAS, Dubois, B, Hauser, SL, Garcia-Blanco, MA, Pericak-Vance, MA, Haines, JL, and Multiple Sclerosis Genetics Group, . "Interleukin 7 receptor alpha chain (IL7R) shows allelic and functional association with multiple sclerosis." Nature Genetics 39, no. 9 (September 2007): 1083-1091. Full Text
  - McCauley, JL, Kenealy, SJ, Margulies, EH, Schnetz-Boutaud, N, Gregory, SG, Hauser, SL, Oksenberg, JR, Pericak-Vance, MA, Haines, JL, and Mortlock, DP. "SNPs in Multi-species Conserved Sequences (MCS) as useful markers in association studies: a practical approach. (Published online)" BMC Genomics 8 (August 6, 2007): 266-. Full Text Link to Item
  - International Multiple Sclerosis Genetics Consortium, , Hafler, DA, Compston, A, Sawcer, S, Lander, ES, Daly, MJ, De Jager, PL, de Bakker, PIW, Gabriel, SB, Mirel, DB, Ivinson, AJ, Pericak-Vance, MA, Gregory, SG, Rioux, JD, McCauley, JL, Haines, JL, Barcellos, LF, Cree, B, Oksenberg, JR, and Hauser, SL. "Risk alleles for multiple sclerosis identified by a genomewide study." The New England Journal of Medicine 357, no. 9 (August 2007): 851-862. Full Text
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  - Schmidt, S, Pericak-Vance, MA, Sawcer, S, Barcellos, LF, Hart, J, Sims, J, Prokop, AM, van der Walt, J, DeLoa, C, Lincoln, RR, Oksenberg, JR, Compston, A, Hauser, SL, Haines, JL, Gregory, SG, and Multiple Sclerosis Genetics Group, . "Allelic association of sequence variants in the herpes virus entry mediator-B gene (PVRL2) with the severity of multiple sclerosis." Genes and Immunity 7, no. 5 (July 2006): 384-392. Full Text
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  - Jarbo, C, Buckley, PG, Piotrowski, A, Mantripragada, KK, Benetkiewicz, M, Diaz de Ståhl, T, Langford, CF, Gregory, SG, Dralle, H, Gimm, O, Bäckdahl, M, Geli, J, Larsson, C, Westin, G, Akerström, G, and Dumanski, JP. "Detailed assessment of chromosome 22 aberrations in sporadic pheochromocytoma using array-CGH." Int J Cancer 118, no. 5 (March 1, 2006): 1159-1164. Full Text Link to Item
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  - Bentley, DR, Deloukas, P, Dunham, A, French, L, Gregory, SG, Humphray, SJ, Mungall, AJ, Ross, MT, Carter, NP, Dunham, I, Scott, CE, Ashcroft, KJ, Atkinson, AL, Aubin, K, Beare, DM, Bethel, G, Brady, N, Brook, JC, Burford, DC, Burrill, WD, Burrows, C, Butler, AP, Carder, C, Catanese, JJ, Clee, CM, Clegg, SM, Cobley, V, Coffey, AJ, Cole, CG, Collins, JE, Conquer, JS, Cooper, RA, Culley, KM, Dawson, E, Dearden, FL, Durbin, RM, de Jong, PJ, Dhami, PD, Earthrowl, ME, Edwards, CA, and Evans, RS et al. "The physical maps for sequencing human chromosomes 1, 6, 9, 10, 13, 20 and X." Nature 409, no. 6822 (February 15, 2001): 942-943. Full Text Link to Item
  - Lander, ES, Linton, LM, Birren, B, Nusbaum, C, Zody, MC, Baldwin, J, Devon, K, Dewar, K, Doyle, M, FitzHugh, W, Funke, R, Gage, D, Harris, K, Heaford, A, Howland, J, Kann, L, Lehoczky, J, LeVine, R, McEwan, P, McKernan, K, Meldrim, J, Mesirov, JP, Miranda, C, Morris, W, Naylor, J, Raymond, C, Rosetti, M, Santos, R, Sheridan, A, Sougnez, C, Stange-Thomann, Y, Stojanovic, N, Subramanian, A, Wyman, D, Rogers, J, Sulston, J, Ainscough, R, Beck, S, Bentley, D, Burton, J, Clee, C, Carter, N, Coulson, A, Deadman, R, Deloukas, P, Dunham, A, Dunham, I, Durbin, R, French, L, Grafham, D, Gregory, S, Hubbard, T, Humphray, S, Hunt, A, Jones, M, Lloyd, C, McMurray, A, Matthews, L, Mercer, S, Milne, S, Mullikin, JC, Mungall, A, Plumb, R, Ross, M, Shownkeen, R, Sims, S, Waterston, RH, Wilson, RK, Hillier, LW, McPherson, JD, Marra, MA, Mardis, ER, Fulton, LA, Chinwalla, AT, Pepin, KH, Gish, WR, Chissoe, SL, Wendl, MC, Delehaunty, KD, Miner, TL, Delehaunty, A, Kramer, JB, Cook, LL, Fulton, RS, Johnson, DL, Minx, PJ, Clifton, SW, Hawkins, T, Branscomb, E, Predki, P, Richardson, P, Wenning, S, Slezak, T, Doggett, N, Cheng, JF, Olsen, A, Lucas, S, Elkin, C, Uberbacher, E, Frazier, M, Gibbs, RA, Muzny, DM, Scherer, SE, Bouck, JB, Sodergren, EJ, Worley, KC, Rives, CM, Gorrell, JH, Metzker, ML, Naylor, SL, Kucherlapati, RS, Nelson, DL, Weinstock, GM, Sakaki, Y, Fujiyama, A, Hattori, M, Yada, T, Toyoda, A, Itoh, T, Kawagoe, C, Watanabe, H, Totoki, Y, Taylor, T, Weissenbach, J, Heilig, R, Saurin, W, Artiguenave, F, Brottier, P, Bruls, T, Pelletier, E, Robert, C, Wincker, P, Smith, DR, Doucette-Stamm, L, Rubenfield, M, Weinstock, K, Lee, HM, Dubois, J, Rosenthal, A, Platzer, M, Nyakatura, G, Taudien, S, Rump, A, Yang, H, Yu, J, Wang, J, Huang, G, Gu, J, Hood, L, Rowen, L, Madan, A, Qin, S, Davis, RW, Federspiel, NA, Abola, AP, Proctor, MJ, Myers, RM, Schmutz, J, Dickson, M, Grimwood, J, Cox, DR, Olson, MV, Kaul, R, Shimizu, N, Kawasaki, K, Minoshima, S, Evans, GA, Athanasiou, M, Schultz, R, Roe, BA, Chen, F, Pan, H, Ramser, J, Lehrach, H, Reinhardt, R, McCombie, WR, de la Bastide, M, Dedhia, N, Blöcker, H, Hornischer, K, Nordsiek, G, Agarwala, R, Aravind, L, Bailey, JA, Bateman, A, Batzoglou, S, Birney, E, Bork, P, Brown, DG, Burge, CB, Cerutti, L, Chen, HC, Church, D, Clamp, M, Copley, RR, Doerks, T, Eddy, SR, Eichler, EE, Furey, TS, Galagan, J, Gilbert, JG, Harmon, C, Hayashizaki, Y, Haussler, D, Hermjakob, H, Hokamp, K, Jang, W, Johnson, LS, Jones, TA, Kasif, S, Kaspryzk, A, Kennedy, S, Kent, WJ, Kitts, P, Koonin, EV, Korf, I, Kulp, D, Lancet, D, Lowe, TM, McLysaght, A, Mikkelsen, T, Moran, JV, Mulder, N, Pollara, VJ, Ponting, CP, Schuler, G, Schultz, J, Slater, G, Smit, AF, Stupka, E, Szustakowki, J, Thierry-Mieg, D, Thierry-Mieg, J, Wagner, L, Wallis, J, Wheeler, R, Williams, A, Wolf, YI, Wolfe, KH, Yang, SP, Yeh, RF, Collins, F, Guyer, MS, Peterson, J, Felsenfeld, A, Wetterstrand, KA, Patrinos, A, Morgan, MJ, de Jong, P, Catanese, JJ, Osoegawa, K, Shizuya, H, Choi, S, Chen, YJ, and International Human Genome Sequencing Consortium, . "Initial sequencing and analysis of the human genome." Nature 409, no. 6822 (February 2001): 860-921. Full Text
  - McPherson, JD, Marra, M, Hillier, L, Waterston, RH, Chinwalla, A, Wallis, J, Sekhon, M, Wylie, K, Mardis, ER, Wilson, RK, Fulton, R, Kucaba, TA, Wagner-McPherson, C, Barbazuk, WB, Gregory, SG, Humphray, SJ, French, L, Evans, RS, Bethel, G, Whittaker, A, Holden, JL, McCann, OT, Dunham, A, Soderlund, C, Scott, CE, Bentley, DR, Schuler, G, Chen, HC, Jang, W, Green, ED, Idol, JR, Maduro, VV, Montgomery, KT, Lee, E, Miller, A, Emerling, S, Kucherlapati, , Gibbs, R, Scherer, S, Gorrell, JH, Sodergren, E, Clerc-Blankenburg, K, Tabor, P, Naylor, S, Garcia, D, de Jong, PJ, Catanese, JJ, Nowak, N, Osoegawa, K, Qin, S, Rowen, L, Madan, A, Dors, M, Hood, L, Trask, B, Friedman, C, Massa, H, Cheung, VG, Kirsch, IR, Reid, T, Yonescu, R, Weissenbach, J, Bruls, T, Heilig, R, Branscomb, E, Olsen, A, Doggett, N, Cheng, JF, Hawkins, T, Myers, RM, Shang, J, Ramirez, L, Schmutz, J, Velasquez, O, Dixon, K, Stone, NE, Cox, DR, Haussler, D, Kent, WJ, Furey, T, Rogic, S, Kennedy, S, Jones, S, Rosenthal, A, Wen, G, Schilhabel, M, Gloeckner, G, Nyakatura, G, Siebert, R, Schlegelberger, B, Korenberg, J, Chen, XN, Fujiyama, A, Hattori, M, Toyoda, A, Yada, T, Park, HS, Sakaki, Y, Shimizu, N, Asakawa, S, Kawasaki, K, Sasaki, T, Shintani, A, Shimizu, A, Shibuya, K, Kudoh, J, Minoshima, S, Ramser, J, Seranski, P, Hoff, C, Poustka, A, Reinhardt, R, Lehrach, H, and International Human Genome Mapping Consortium, . "A physical map of the human genome." Nature 409, no. 6822 (February 2001): 934-941. Full Text
  - Maris, JM, Guo, C, Blake, D, White, PS, Hogarty, MD, Thompson, PM, Rajalingam, V, Gerbing, R, Stram, DO, Matthay, KK, Seeger, RC, and Brodeur, GM. "Comprehensive analysis of chromosome 1p deletions in neuroblastoma." Medical and Pediatric Oncology 36, no. 1 (January 1, 2001): 32-36. Full Text
  - Schutte, BC, Carpten, JD, Forus, A, Gregory, SG, Horii, A, and White, PS. "Report of the sixth international workshop on human chromosome 1 mapping 2000." Cytogenetics and Cell Genetics 92, no. 1-2 (January 1, 2001): 23-48.
  - White, PS, Thompson, PM, Seifried, BA, Sulman, EP, Jensen, SJ, Guo, C, Maris, JM, Hogarty, MD, Allen, C, Biegel, JA, Matise, TC, Gregory, SG, Reynolds, CP, and Brodeur, GM. "Detailed molecular analysis of 1p36 in neuroblastoma." Medical and Pediatric Oncology 36, no. 1 (January 2001): 37-41. Full Text
  - Carpten, JD, Makalowska, I, Robbins, CM, Scott, N, Sood, R, Connors, TD, Bonner, TI, Smith, JR, Faruque, MU, Stephan, DA, Pinkett, H, Morgenbesser, SD, Su, K, Graham, C, Gregory, SG, Williams, H, McDonald, L, Baxevanis, AD, Klingler, KW, Landes, GM, and Trent, JM. "A 6-Mb high-resolution physical and transcription map encompassing the hereditary prostate cancer 1 (HPC1) region." Genomics 64, no. 1 (February 2000): 1-14. Full Text
  - Shackleton, S, Lloyd, DJ, Jackson, SN, Evans, R, Niermeijer, MF, Singh, BM, Schmidt, H, Brabant, G, Kumar, S, Durrington, PN, Gregory, S, O'Rahilly, S, and Trembath, RC. "LMNA, encoding lamin A/C, is mutated in partial lipodystrophy." Nature Genetics 24, no. 2 (February 2000): 153-156. Full Text
  - Schutte, BC, Bjork, BC, Coppage, KB, Malik, MI, Gregory, SG, Scott, DJ, Brentzell, LM, Watanabe, Y, Dixon, MJ, and Murray, JC. "A preliminary gene map for the Van der Woude syndrome critical region derived from 900 kb of genomic sequence at 1q32-q41." Genome Research 10, no. 1 (January 2000): 81-94.
  - White, PS, Forus, A, Matise, TC, Schutte, BC, Spieker, N, Stanier, P, Vance, JM, and Gregory, SG. "Fifth International Workshop on Human Chromosome 1 Mapping 1999, the Sanger Centre, Cambridge, UK, August 5-7 1999: Report." Cytogenetics and Cell Genetics 87, no. 3-4 (December 1, 1999): 143-163.
  - Labay, V, Raz, T, Baron, D, Mandel, H, Williams, H, Barrett, T, Szargel, R, McDonald, L, Shalata, A, Nosaka, K, Gregory, S, and Cohen, N. "Mutations in SLC19A2 cause thiamine-responsive megaloblastic anaemia associated with diabetes mellitus and deafness." Nature Genetics 22, no. 3 (July 1999): 300-304. Full Text
  - Gregory, SG, Vaudin, M, Wooster, R, Coleman, M, Mischke, D, Porter, C, Schutte, BC, White, P, and Vance, JM. "Fourth International Workshop on Human Chromosome 1 Mapping 1998, Sanger Centre, Cambridge, United Kingdom, June 25-27 1998: Report." Cytogenetics and Cell Genetics 83, no. 3-4 (1998): 147-167.
  - Gregory, SG, Vaudin, M, Wooster, R, Coleman, M, Mischke, D, Porter, C, Schutte, BC, White, P, and Vance, JM. "Report of the fourth international workshop on human chromosome 1 mapping 1998." Cytogenetics and Cell Genetics 83, no. 3-4 (January 1, 1998): 148-167. (Review) Link to Item
  - Gregory, SG, Howell, GR, and Bentley, DR. "Genome mapping by fluorescent fingerprinting." Genome Res 7, no. 12 (December 1997): 1162-1168. Link to Item
  - Roest Crollius, H, Ross, MT, Grigoriev, A, Knights, CJ, Holloway, E, Misfud, J, Li, K, Playford, M, Gregory, SG, Humphray, SJ, Coffey, AJ, See, CG, Marsh, S, Vatcheva, R, Kumlien, J, Labella, T, Lam, V, Rak, KH, Todd, K, Mott, R, Graeser, D, Rappold, G, Zehetner, G, Poustka, A, Bentley, DR, Monaco, AP, and Lehrach, H. "An integrated YAC map of the human X chromosome." Genome Res 6, no. 10 (October 1996): 943-955. Link to Item
  - Forbes, SA, Brennan, L, Richardson, M, Coffey, A, Cole, CG, Gregory, SG, Bentley, DR, Mumm, S, Moore, GE, and Stanier, P. "Refined mapping and YAC contig construction of the X-linked cleft palate and ankyloglossia locus (CPX) including the proximal X-Y homology breakpoint within Xq21.3." Genomics 31, no. 1 (January 1, 1996): 36-43. Full Text Link to Item
  - Van de Vosse, E, Bergen, AA, Meershoek, EJ, Oosterwijk, JC, Gregory, S, Bakker, B, Weissenbach, J, Coffey, AJ, van Ommen, GJ, and Den Dunnen, JT. "An Xp22.1-p22.2 YAC contig encompassing the disease loci for RS, KFSD, CLS, HYP and RP15: refined localization of RS." Eur J Hum Genet 4, no. 2 (1996): 101-104. Link to Item
  - Wooster, R, Bignell, G, Lancaster, J, Swift, S, Seal, S, Mangion, J, Collins, N, Gregory, S, Gumbs, C, Michlem, G, Barfoot, R, Hamoudi, R, Patel, S, Rice, C, Biggs, P, Hashim, Y, Smith, A, Connor, F, and Arason, A. "Addendum: Identification of the breast cancer susceptibility gene BRCA2 (Nature (1995) 378 (789-792))." Nature 379, no. 6567 (January 1, 1996): 749-null.
  - Wooster, R, Bignell, G, Lancaster, J, Swift, S, Seal, S, Mangion, J, Collins, N, Gregory, S, Gumbs, C, and Micklem, G. "Identification of the breast cancer susceptibility gene BRCA2." Nature 378, no. 6559 (December 1995): 789-792. Full Text
  - Fantes, JA, Oghene, K, Boyle, S, Danes, S, Fletcher, JM, Bruford, EA, Williamson, K, Seawright, A, Schedl, A, Hanson, I, Zehetner, G, Bhogal, R, Lehrach, H, Gregory, S, Williams, J, Little, PFR, Sellar, GC, Hoovers, J, Mannens, M, Weissenbach, J, Junien, C, Heyningen, VV, and Bickmore, WA. "A high-resolution integrated physical, cytogenetic, and genetic map of human chromosome 11: distal p13 to proximal p15.1." Genomics 25, no. 2 (1995): 447-461.
  - Redeker, E, Hoovers, JM, Alders, M, van Moorsel, CJ, Ivens, AC, Gregory, S, Kalikin, L, Bliek, J, de Galan, L, and van den Bogaard, R. "An integrated physical map of 210 markers assigned to the short arm of human chromosome 11." Genomics 21, no. 3 (June 1994): 538-550. Link to Item
  - Heding, IJ, Ivens, AC, Wilson, J, Strivens, M, Gregory, S, Hoovers, JM, Mannens, M, Redeker, B, Porteous, D, and van Heyningen, V. "The generation of ordered sets of cosmid DNA clones from human chromosome region 11p." Genomics 13, no. 1 (May 1992): 89-94. Link to Item
- Book Sections
  - Gregory, SG. "The epigenetics of Autism-Running beyond the bases." In Frontiers in Autism Research: New Horizons for Diagnosis and Treatment, 303-333. January 1, 2014. Full Text
  - Markunas, CA, Ashley-Koch, AE, and Gregory, SG. "Genetics of the Chiari I and II Malformations." In The Chiari Malformations, 93-101.: Springer New York, 2013. Full Text
  - Gregory, SG. "Genomic Rearrangements in Autism: The Contribution of Copy Number Loss and Gain to the Etiology of Autism Spectrum Disorders." S17-S17. October 2011. Link to Item
  - "Genomics and Bioinformatics." In Genetic Analysis of Complex Diseases: Second Edition, 423-454. October 7, 2005. Full Text
  - Gregory, S, and Gilbert, J. "Strategies for genotype generation." Unit-1.3. 2005. Full Text
  - Coffey, A, Gregory, S, and Cole, CG. "Alu-PCR fingerprinting of YACs." 97-114. 1996. Link to Item
- Reports
  - Schutte, BC, Carpten, JD, Forus, A, Gregory, SG, Horii, A, and White, PS. Report and abstracts of the sixth international workshop on human chromosome 1 mapping 2000. Iowa City, Iowa, USA. 30 September-3 October 2000. 2001. Full Text Link to Item
  - White, PS, Forus, A, Matise, TC, Schutte, BC, Spieker, N, Stanier, P, Vance, JM, and Gregory, SG. Report of the fifth international workshop on human chromosome 1 mapping 1999. 1999. Full Text Link to Item
  - Gregory, SG, Vaudin, M, Wooster, R, Coleman, M, Mischke, D, Porter, C, Schutte, BC, White, P, and Vance, JM. Report of the fourth international workshop on human chromosome 1 mapping 1998. 1998. Full Text Link to Item
  - Vance, JM, Matise, TC, Wooster, R, Schutte, BC, Bruns, GAP, Van Roy, N, Brodeur, GM, Tao, YX, Gregory, S, Weith, A, Vaudin, M, and White, P. Third International Chromosome 1 Maping Workshop, Duke University, Durham, NC, USA, 25-27 April 1997: Report of the third international workshop on human chromosome 1 mapping 1997. December 1, 1997.
  - Vance, JM, Matise, TC, Wooster, R, Schutte, BC, Bruns, GA, van Roy, N, Brodeur, GM, Tao, YX, Gregory, S, Weith, A, Vaudin, M, and White, P. Report and abstracts of the third international workshop on human chromosome 1 mapping 1997. 1997. Link to Item
- Conference Papers
  - Jewell, M, Premont, RT, Gibson, J, Glover, W, Dinh, TA, Wauthier, EL, Reid, LM, Gregory, SG, Sethupathy, P, Hsu, DS, and Diehl, AM. "Yap1 As a Therapeutic Target in Fibrolamellar Carcinoma." Annual Meeting of the American-Association-for-the-Study-of-Liver-Diseases (AASLD) / Liver Meeting. San Francisco, CA. November 9, 2018 - November 13, 2018.: WILEY, October 1, 2018. Link to Item
  - Kanayama, M, Xu, S, Danzaki, K, Gibson, JR, Inoue, M, Gregory, SG, and Shinohara, ML. "Skewing the population balance between lymphoid and myeloid cells by osteopontin isoforms." 5th Annual Meeting of the International-Cytokine-and-Interferon-Society (ICIS). Int Cytokine & Interferon Soc, Kanazawa, JAPAN. October 29, 2017 - November 2, 2017.: ACADEMIC PRESS LTD- ELSEVIER SCIENCE LTD, December 1, 2017. Link to Item
  - Cote, SA, Gregory, SG, Winnike, J, Knagge, K, Ilkayeva, O, O'Connell, T, Bain, J, Muehlbauer, M, Maichle, S, Newby, LK, and Zhang, X. "Integrated metabolomic and transcriptomic profiles of males with multiple sclerosis." February 2016. Link to Item
  - Shah, SH, Kwee, L, Stitziel, N, Hauser, ER, Haynes, C, Kathiresan, S, Gregory, SG, and Kraus, WE. "Rare Variants Identified With Whole Exome Chip Genotyping Are Associated With Insulin Resistance and Glycemic Control." November 26, 2013. Link to Item
  - Kraus, WE, Feng, S, Hauser, ER, Gregory, SG, Haynes, C, Dowdy, ZE, Craig, DM, and Shah, SH. "Association of Gene Expression Signatures with Small Molecule Metabolic Intermediates that Predict Cardiovascular Mortality in CATHGEN." March 26, 2013. Link to Item
  - Shah, AA, Craig, DM, Haynes, C, Sebek, JK, Grass, E, Abramson, K, Smith, PK, Hauser, ER, Gregory, SG, Kraus, WE, and Shah, SH. "Genome-Wide Association Identifies Genetic Variants Associated With Vein Graft Stenosis After Coronary Artery Bypass Grafting." November 22, 2011. Link to Item
  - Minear, MA, Afshari, NA, Balajonda, E, Zhao, B, Rimmler, J, Li, Y-J, Klintworth, GK, and Gregory, SG. "Analysis of SLC4A11 and COL8A2 Mutations in Fuchs Endothelial Corneal Dystrophy (FECD)." : ASSOC RESEARCH VISION OPHTHALMOLOGY INC, April 1, 2010. Link to Item
  - Wang, L, Hauser, ER, Crosslin, D, Nelson, S, Hale, AB, Gregory, SG, Shah, SH, Kraus, WE, Goldschmidt-Clermont, PJ, and Vance, JM. "Genomic convergence identified CAPG and VAMP8 as candidate genes for CAD." October 16, 2007. Link to Item
  - Wang, L, Hauser, ER, Shah, SH, Haynes, C, Rose, JM, Harris, M, Rombaut, J, Nelson, S, Hale, AB, Crosslin, D, Gregory, SG, Granger, CB, Haines, JL, Jones, CJ, Crossman, DC, Kraus, WE, Pericak-Vance, MA, Goldschmidt-Clermont, PJ, and Vance, JM. "Identification of kalirin gene as a novel coronary artery disease gene through peak-wide association mapping on chromosome 3q13-21." October 31, 2006. Link to Item
  - Gregory, SG, Johnson, NV, Connelly, JJ, Virgadamo, J, McLendon, RE, Vance, JM, and Bigner, DD. "Characterizing genomic rearrangements in oligodendroglioma using whole genome tilepath hrCGH arrays." October 2006. Link to Item
  - Johnson, NV, Connelly, JJ, Virigadamo, J, McLendon, RE, Vance, JM, Bigner, DD, and Gregory, SG. "Characterizing oligodendroglioma rearrangements using whole genome hrCGH arrays." : AMER ASSOC CANCER RESEARCH, April 1, 2006. Link to Item
  - Meza-Zepeda, LA, Kresse, SH, Barragan-Polania, AH, Wang, J, Kristiansen, BE, Kuo, W-L, Gregory, SG, Gray, JW, and Myklebost, O. "Profiling of DNA copy number changes in sarcomas by array comparative genomic hybridization." : AMER ASSOC CANCER RESEARCH, April 1, 2006. Link to Item
  - Wang, LY, Hauser, ER, Shah, SH, Kraus, WE, Seo, D, Huang, LL, Rose, JM, Xu, H, Pedersen, B, Gregory, SG, Pericak-Vance, M, Goldschmidt-Clermont, P, and Vance, JM. "Identification of a novel locus for left main coronary artery disease." October 25, 2005. Link to Item
  - Haines, JL, Schmidt, S, Sawcer, S, Barcellos, LF, Gregory, SG, Sims, J, Booze, M, Vance, JM, Oksenberg, JR, Hauser, SL, Compston, A, and Pericak-Vance, MA. "Comprehensive analysis of candidate modifier genes for multiple sclerosis (MS) on chromosome 19q13." November 2003. Link to Item
  - Maris, JM, Guo, C, Blake, D, White, PS, Hogarty, MD, Thompson, PM, Rajalingam, V, Gerbing, R, Stram, DO, Matthay, KK, Seeger, RC, and Brodeur, GM. "Comprehensive analysis of chromosome 1p deletions in neuroblastoma." January 2001. Full Text
  - Little, D, Wu, CL, D'Amico, R, Corcoran, D, Gregory, S, and Guilak, F. "Epigenetic Analysis of Adipose Stem Cells in Obesity Identifies Dysregulation of Critical Pathways in Musculoskeletal Regeneration and Disease." Orthopedic Research Society. Las Vegas, NV. 2015.
Teaching & Mentoring
Recent Courses
Advising & Mentoring
- Dr. Gregory is/has mentored high school (12), undergraduate (14), graduate candidate rotation (9), graduate candidate thesis committee (14), graduate candidate primary mentor (6), Masters candidate (1), Post-doctoral fellow (4) and junior faculty (5) trainees.
Teaching Activities
- 2003, 2004 and 2011 Lecturer, “Molecules and Cells” (IND100B),
  2004 and 2005 Co-Director, Lecturer, “Fundamentals in Genetics” (MGTP),
  
  2004 – 2013 Director and Instructor, Duke Bioinformatics Workshop
  
  2005 Lecturer, “Algorithms in computational biology” (BGT 203)
  2005 – 2010, 2012 – present Lecturer, "Human Genetics" (MGM/UPGG 732)
  2006 – 2008, 2014, 2016 Lecturer, Open Door Workshop, Montevideo, Uruguay
  
  2006 – present Director, Lecturer, Clinical Research Training Program, “Introduction to Medical Genetics” (CRTP 243)
  
  2010-11, 2013-14, 2016 Guest Lecturer, “Genetic Engineer/Biotech” (BIO 280S)
  
  2011 Lecturer, Open Door Workshop, Dubai, UAE.
  
  2012 Lecturer, “Applied Genomics and Personalized Medicine” (N562)
  
  2012 Lecturer, Open Door Workshop, Ho Chi Minh City, Vietnam, 2012
  2013 – present Lecturer, "Genome Technologies" (MGM/UPGG 778)
  2015 – present Faculty reviewer, “Grant writing” (UPGEN 702)
  
  2016 Lecturer, Open Door Workshop, Bangkok, Thailand
Scholarly, Clinical, & Service Activities
Presentations & Appearances
Outreach & Engaged Scholarship
- Faculty Mentor. Durham School of the Arts Independent Study Partnership with DMPI. 2014 - 2020 2014 - 2020
Service to the Profession
Service to Duke
Academic & Administrative Activities
- Director and Instructor - Duke Bioinformatics Workshop 2004-2013
  
  Founding Co-Director - Duke Epigenetics an Epigenomics Program (DEEP) 2011-present
  
  Co-Director - Genetics and Genomics Basic Sciences Program 2014-2017
  
  Director - Duke Center for Research in Autoimmunity and Multiple Sclerosis (DREAMS), Department of Neurology.
  Organizer of DREAMS Seminar Speaker Series 2015-present
  
  Director of Graduate Studies - Duke University Program of Genetics and Genomics 2017-Present

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Education, Training, & Certifications

Duke Appointment History

Academic Positions Outside Duke

In the News

Awards & Honors

Selected Grants

Selected Publications

Academic Articles

Book Sections

Reports

Conference Papers

Recent Courses

Advising & Mentoring

Teaching Activities

Presentations & Appearances

Outreach & Engaged Scholarship

Service to the Profession

Service to Duke

Academic & Administrative Activities