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cophesim: a comprehensive phenotype simulator for testing novel association methods.

Publication ,  Journal Article
Zhbannikov, IY; Arbeev, KG; Yashin, AI
Published in: F1000Research
January 2017

Simulation is important in evaluating novel methods when input data is not easily obtainable or specific assumptions are needed. We present cophesim, a software to add the phenotype to generated genotype data prepared with a genetic simulator. The output of cophesim can be used as a direct input for different genome wide association study tools. cophesim is available from https://bitbucket.org/izhbannikov/cophesim.

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Published In

F1000Research

DOI

EISSN

2046-1402

ISSN

2046-1402

Publication Date

January 2017

Volume

6

Start / End Page

1294

Related Subject Headings

  • 1112 Oncology and Carcinogenesis
  • 1103 Clinical Sciences
  • 0601 Biochemistry and Cell Biology
 

Citation

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Zhbannikov, I. Y., Arbeev, K. G., & Yashin, A. I. (2017). cophesim: a comprehensive phenotype simulator for testing novel association methods. F1000Research, 6, 1294. https://doi.org/10.12688/f1000research.11968.1
Zhbannikov, Ilya Y., Konstantin G. Arbeev, and Anatoliy I. Yashin. “cophesim: a comprehensive phenotype simulator for testing novel association methods.F1000Research 6 (January 2017): 1294. https://doi.org/10.12688/f1000research.11968.1.
Zhbannikov IY, Arbeev KG, Yashin AI. cophesim: a comprehensive phenotype simulator for testing novel association methods. F1000Research. 2017 Jan;6:1294.
Zhbannikov, Ilya Y., et al. “cophesim: a comprehensive phenotype simulator for testing novel association methods.F1000Research, vol. 6, Jan. 2017, p. 1294. Epmc, doi:10.12688/f1000research.11968.1.
Zhbannikov IY, Arbeev KG, Yashin AI. cophesim: a comprehensive phenotype simulator for testing novel association methods. F1000Research. 2017 Jan;6:1294.

Published In

F1000Research

DOI

EISSN

2046-1402

ISSN

2046-1402

Publication Date

January 2017

Volume

6

Start / End Page

1294

Related Subject Headings

  • 1112 Oncology and Carcinogenesis
  • 1103 Clinical Sciences
  • 0601 Biochemistry and Cell Biology