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Advanced photon counting CT imaging pipeline for cardiac phenotyping of apolipoprotein E mouse models.

Publication ,  Journal Article
Allphin, AJ; Mahzarnia, A; Clark, DP; Qi, Y; Han, ZY; Bhandari, P; Ghaghada, KB; Badea, A; Badea, CT
Published in: PLoS One
2023

BACKGROUND: Cardiovascular disease (CVD) is associated with the apolipoprotein E (APOE) gene and lipid metabolism. This study aimed to develop an imaging-based pipeline to comprehensively assess cardiac structure and function in mouse models expressing different APOE genotypes using photon-counting computed tomography (PCCT). METHODS: 123 mice grouped based on APOE genotype (APOE2, APOE3, APOE4, APOE knockout (KO)), gender, human NOS2 factor, and diet (control or high fat) were used in this study. The pipeline included PCCT imaging on a custom-built system with contrast-enhanced in vivo imaging and intrinsic cardiac gating, spectral and temporal iterative reconstruction, spectral decomposition, and deep learning cardiac segmentation. Statistical analysis evaluated genotype, diet, sex, and body weight effects on cardiac measurements. RESULTS: Our results showed that PCCT offered high quality imaging with reduced noise. Material decomposition enabled separation of calcified plaques from iodine enhanced blood in APOE KO mice. Deep learning-based segmentation showed good performance with Dice scores of 0.91 for CT-based segmentation and 0.89 for iodine map-based segmentation. Genotype-specific differences were observed in left ventricular volumes, heart rate, stroke volume, ejection fraction, and cardiac index. Statistically significant differences were found between control and high fat diets for APOE2 and APOE4 genotypes in heart rate and stroke volume. Sex and weight were also significant predictors of cardiac measurements. The inclusion of the human NOS2 gene modulated these effects. CONCLUSIONS: This study demonstrates the potential of PCCT in assessing cardiac structure and function in mouse models of CVD which can help in understanding the interplay between genetic factors, diet, and cardiovascular health.

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Published In

PLoS One

DOI

EISSN

1932-6203

Publication Date

2023

Volume

18

Issue

10

Start / End Page

e0291733

Location

United States

Related Subject Headings

  • Tomography, X-Ray Computed
  • Mice, Knockout
  • Mice
  • Iodine
  • Humans
  • General Science & Technology
  • Cardiovascular Diseases
  • Apolipoproteins E
  • Apolipoprotein E4
  • Apolipoprotein E3
 

Citation

APA
Chicago
ICMJE
MLA
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Allphin, A. J., Mahzarnia, A., Clark, D. P., Qi, Y., Han, Z. Y., Bhandari, P., … Badea, C. T. (2023). Advanced photon counting CT imaging pipeline for cardiac phenotyping of apolipoprotein E mouse models. PLoS One, 18(10), e0291733. https://doi.org/10.1371/journal.pone.0291733
Allphin, Alex J., Ali Mahzarnia, Darin P. Clark, Yi Qi, Zay Y. Han, Prajwal Bhandari, Ketan B. Ghaghada, Alexandra Badea, and Cristian T. Badea. “Advanced photon counting CT imaging pipeline for cardiac phenotyping of apolipoprotein E mouse models.PLoS One 18, no. 10 (2023): e0291733. https://doi.org/10.1371/journal.pone.0291733.
Allphin AJ, Mahzarnia A, Clark DP, Qi Y, Han ZY, Bhandari P, et al. Advanced photon counting CT imaging pipeline for cardiac phenotyping of apolipoprotein E mouse models. PLoS One. 2023;18(10):e0291733.
Allphin, Alex J., et al. “Advanced photon counting CT imaging pipeline for cardiac phenotyping of apolipoprotein E mouse models.PLoS One, vol. 18, no. 10, 2023, p. e0291733. Pubmed, doi:10.1371/journal.pone.0291733.
Allphin AJ, Mahzarnia A, Clark DP, Qi Y, Han ZY, Bhandari P, Ghaghada KB, Badea A, Badea CT. Advanced photon counting CT imaging pipeline for cardiac phenotyping of apolipoprotein E mouse models. PLoS One. 2023;18(10):e0291733.

Published In

PLoS One

DOI

EISSN

1932-6203

Publication Date

2023

Volume

18

Issue

10

Start / End Page

e0291733

Location

United States

Related Subject Headings

  • Tomography, X-Ray Computed
  • Mice, Knockout
  • Mice
  • Iodine
  • Humans
  • General Science & Technology
  • Cardiovascular Diseases
  • Apolipoproteins E
  • Apolipoprotein E4
  • Apolipoprotein E3