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Computational models of compound nerve action potentials: Efficient filter-based methods to quantify effects of tissue conductivities, conduction distance, and nerve fiber parameters.

Publication ,  Journal Article
Peña, E; Pelot, NA; Grill, WM
Published in: PLoS computational biology
March 2024

Peripheral nerve recordings can enhance the efficacy of neurostimulation therapies by providing a feedback signal to adjust stimulation settings for greater efficacy or reduced side effects. Computational models can accelerate the development of interfaces with high signal-to-noise ratio and selective recording. However, validation and tuning of model outputs against in vivo recordings remains computationally prohibitive due to the large number of fibers in a nerve.We designed and implemented highly efficient modeling methods for simulating electrically evoked compound nerve action potential (CNAP) signals. The method simulated a subset of fiber diameters present in the nerve using NEURON, interpolated action potential templates across fiber diameters, and filtered the templates with a weighting function derived from fiber-specific conduction velocity and electromagnetic reciprocity outputs of a volume conductor model. We applied the methods to simulate CNAPs from rat cervical vagus nerve.Brute force simulation of a rat vagal CNAP with all 1,759 myelinated and 13,283 unmyelinated fibers in NEURON required 286 and 15,860 CPU hours, respectively, while filtering interpolated templates required 30 and 38 seconds on a desktop computer while maintaining accuracy. Modeled CNAP amplitude could vary by over two orders of magnitude depending on tissue conductivities and cuff opening within experimentally relevant ranges. Conduction distance and fiber diameter distribution also strongly influenced the modeled CNAP amplitude, shape, and latency. Modeled and in vivo signals had comparable shape, amplitude, and latency for myelinated fibers but not for unmyelinated fibers.Highly efficient methods of modeling neural recordings quantified the large impact that tissue properties, conduction distance, and nerve fiber parameters have on CNAPs. These methods expand the computational accessibility of neural recording models, enable efficient model tuning for validation, and facilitate the design of novel recording interfaces for neurostimulation feedback and understanding physiological systems.

Duke Scholars

Published In

PLoS computational biology

DOI

EISSN

1553-7358

ISSN

1553-734X

Publication Date

March 2024

Volume

20

Issue

3

Start / End Page

e1011833

Related Subject Headings

  • Rats
  • Peripheral Nerves
  • Neural Conduction
  • Nerve Fibers
  • Evoked Potentials
  • Computer Simulation
  • Bioinformatics
  • Animals
  • Action Potentials
  • 08 Information and Computing Sciences
 

Citation

APA
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ICMJE
MLA
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Peña, E., Pelot, N. A., & Grill, W. M. (2024). Computational models of compound nerve action potentials: Efficient filter-based methods to quantify effects of tissue conductivities, conduction distance, and nerve fiber parameters. PLoS Computational Biology, 20(3), e1011833. https://doi.org/10.1371/journal.pcbi.1011833
Peña, Edgar, Nicole A. Pelot, and Warren M. Grill. “Computational models of compound nerve action potentials: Efficient filter-based methods to quantify effects of tissue conductivities, conduction distance, and nerve fiber parameters.PLoS Computational Biology 20, no. 3 (March 2024): e1011833. https://doi.org/10.1371/journal.pcbi.1011833.
Peña, Edgar, et al. “Computational models of compound nerve action potentials: Efficient filter-based methods to quantify effects of tissue conductivities, conduction distance, and nerve fiber parameters.PLoS Computational Biology, vol. 20, no. 3, Mar. 2024, p. e1011833. Epmc, doi:10.1371/journal.pcbi.1011833.

Published In

PLoS computational biology

DOI

EISSN

1553-7358

ISSN

1553-734X

Publication Date

March 2024

Volume

20

Issue

3

Start / End Page

e1011833

Related Subject Headings

  • Rats
  • Peripheral Nerves
  • Neural Conduction
  • Nerve Fibers
  • Evoked Potentials
  • Computer Simulation
  • Bioinformatics
  • Animals
  • Action Potentials
  • 08 Information and Computing Sciences