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Conformational trajectory of the HIV-1 fusion peptide during CD4-induced envelope opening.

Publication ,  Journal Article
Thakur, B; Katte, RH; Xu, W; Janowska, K; Sammour, S; Henderson, R; Lu, M; Kwong, PD; Acharya, P
Published in: Nat Commun
May 17, 2025

The hydrophobic fusion peptide (FP), a critical component of the HIV-1 entry machinery, is located at the N terminus of the envelope (Env) gp41 subunit. The receptor-binding gp120 subunit of Env forms a heterodimer with gp41. The gp120/gp41 heterodimer assembles into a homotrimer, in which FP is accessible for antibody binding. Env conformational changes or "opening" that follow receptor binding result in FP relocating to a newly formed interprotomer pocket at the gp41-gp120 interface where it is sterically inaccessible to antibodies. The mechanistic steps connecting the entry-related transition of antibody accessible-to-inaccessible FP configurations remain unresolved. Here, using SOSIP-stabilized Env ectodomains, we visualize that the FP remains accessible for antibody binding despite substantial receptor-induced Env opening. We delineate stepwise Env opening from its closed state to a functional CD4-bound symmetrically open Env in which we show that FP was accessible for antibody binding. We define downstream re-organizations that lead to the formation of a gp120/gp41 cavity into which the FP buries to become inaccessible for antibody binding. These findings improve our understanding of HIV-1 entry and delineate the entry-related conformational trajectory of a key site of HIV vulnerability to neutralizing antibody.

Duke Scholars

Published In

Nat Commun

DOI

EISSN

2041-1723

Publication Date

May 17, 2025

Volume

16

Issue

1

Start / End Page

4595

Location

England

Related Subject Headings

  • Virus Internalization
  • Protein Conformation
  • Protein Binding
  • Humans
  • HIV-1
  • HIV Envelope Protein gp41
  • HIV Envelope Protein gp120
  • HIV Antibodies
  • HEK293 Cells
  • CD4 Antigens
 

Citation

APA
Chicago
ICMJE
MLA
NLM
Thakur, B., Katte, R. H., Xu, W., Janowska, K., Sammour, S., Henderson, R., … Acharya, P. (2025). Conformational trajectory of the HIV-1 fusion peptide during CD4-induced envelope opening. Nat Commun, 16(1), 4595. https://doi.org/10.1038/s41467-025-59721-2
Thakur, Bhishem, Revansiddha H. Katte, Wang Xu, Katarzyna Janowska, Salam Sammour, Rory Henderson, Maolin Lu, Peter D. Kwong, and Priyamvada Acharya. “Conformational trajectory of the HIV-1 fusion peptide during CD4-induced envelope opening.Nat Commun 16, no. 1 (May 17, 2025): 4595. https://doi.org/10.1038/s41467-025-59721-2.
Thakur B, Katte RH, Xu W, Janowska K, Sammour S, Henderson R, et al. Conformational trajectory of the HIV-1 fusion peptide during CD4-induced envelope opening. Nat Commun. 2025 May 17;16(1):4595.
Thakur, Bhishem, et al. “Conformational trajectory of the HIV-1 fusion peptide during CD4-induced envelope opening.Nat Commun, vol. 16, no. 1, May 2025, p. 4595. Pubmed, doi:10.1038/s41467-025-59721-2.
Thakur B, Katte RH, Xu W, Janowska K, Sammour S, Henderson R, Lu M, Kwong PD, Acharya P. Conformational trajectory of the HIV-1 fusion peptide during CD4-induced envelope opening. Nat Commun. 2025 May 17;16(1):4595.

Published In

Nat Commun

DOI

EISSN

2041-1723

Publication Date

May 17, 2025

Volume

16

Issue

1

Start / End Page

4595

Location

England

Related Subject Headings

  • Virus Internalization
  • Protein Conformation
  • Protein Binding
  • Humans
  • HIV-1
  • HIV Envelope Protein gp41
  • HIV Envelope Protein gp120
  • HIV Antibodies
  • HEK293 Cells
  • CD4 Antigens