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Deep learning chest X-ray age, epigenetic aging clocks, and associations with age-related subclinical disease in the Project Baseline Health Study.

Publication ,  Journal Article
Chandra, J; Short, S; Rodriguez, F; Maron, DJ; Pagidipati, N; Hernandez, AF; Mahaffey, KW; Shah, SH; Kiel, DP; Lu, MT; Raghu, VK
Published in: J Gerontol A Biol Sci Med Sci
September 19, 2025

BACKGROUND: Chronological age is an important component of medical risk scores and decision-making. However, there is considerable variability in how individuals age. We recently published an open-source deep learning model to assess biological age from chest radiographs (CXR-Age), which predicts all-cause and cardiovascular mortality better than chronological age. Here, we compare CXR-Age to 2 established epigenetic aging clocks (First generation-Horvath Age; Second generation-DNAm PhenoAge) to test which is more strongly associated with cardiopulmonary disease and frailty. METHODS: Our cohort consisted of 2097 participants from the Project Baseline Health Study, a prospective cohort study of individuals from 4 US sites. We compared the association between the different aging clocks and measures of cardiopulmonary disease, frailty, and protein abundance collected at the participant's first annual visit using linear regression models adjusted for common confounders. RESULTS: We found that CXR-Age was associated with coronary calcium, cardiovascular risk factors, worsening pulmonary function, increased frailty, and abundance in plasma of 2 proteins implicated in neuroinflammation and aging. Associations with DNAm PhenoAge were weaker for pulmonary function and all metrics in middle-age adults. We identified 13 proteins that were associated with DNAm PhenoAge, one (CDH13) of which was also associated with CXR-Age. No associations were found with Horvath Age. CONCLUSIONS: These results suggest that CXR-Age may serve as a better metric of cardiopulmonary aging than epigenetic aging clocks, especially in midlife adults.

Duke Scholars

Published In

J Gerontol A Biol Sci Med Sci

DOI

EISSN

1758-535X

Publication Date

September 19, 2025

Volume

80

Issue

10

Location

United States

Related Subject Headings

  • Radiography, Thoracic
  • Prospective Studies
  • Middle Aged
  • Male
  • Humans
  • Gerontology
  • Frailty
  • Female
  • Epigenesis, Genetic
  • Deep Learning
 

Citation

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Chandra, J., Short, S., Rodriguez, F., Maron, D. J., Pagidipati, N., Hernandez, A. F., … Raghu, V. K. (2025). Deep learning chest X-ray age, epigenetic aging clocks, and associations with age-related subclinical disease in the Project Baseline Health Study. J Gerontol A Biol Sci Med Sci, 80(10). https://doi.org/10.1093/gerona/glaf173
Chandra, Jay, Sarah Short, Fatima Rodriguez, David J. Maron, Neha Pagidipati, Adrian F. Hernandez, Kenneth W. Mahaffey, et al. “Deep learning chest X-ray age, epigenetic aging clocks, and associations with age-related subclinical disease in the Project Baseline Health Study.J Gerontol A Biol Sci Med Sci 80, no. 10 (September 19, 2025). https://doi.org/10.1093/gerona/glaf173.
Chandra J, Short S, Rodriguez F, Maron DJ, Pagidipati N, Hernandez AF, et al. Deep learning chest X-ray age, epigenetic aging clocks, and associations with age-related subclinical disease in the Project Baseline Health Study. J Gerontol A Biol Sci Med Sci. 2025 Sep 19;80(10).
Chandra, Jay, et al. “Deep learning chest X-ray age, epigenetic aging clocks, and associations with age-related subclinical disease in the Project Baseline Health Study.J Gerontol A Biol Sci Med Sci, vol. 80, no. 10, Sept. 2025. Pubmed, doi:10.1093/gerona/glaf173.
Chandra J, Short S, Rodriguez F, Maron DJ, Pagidipati N, Hernandez AF, Mahaffey KW, Shah SH, Kiel DP, Lu MT, Raghu VK. Deep learning chest X-ray age, epigenetic aging clocks, and associations with age-related subclinical disease in the Project Baseline Health Study. J Gerontol A Biol Sci Med Sci. 2025 Sep 19;80(10).
Journal cover image

Published In

J Gerontol A Biol Sci Med Sci

DOI

EISSN

1758-535X

Publication Date

September 19, 2025

Volume

80

Issue

10

Location

United States

Related Subject Headings

  • Radiography, Thoracic
  • Prospective Studies
  • Middle Aged
  • Male
  • Humans
  • Gerontology
  • Frailty
  • Female
  • Epigenesis, Genetic
  • Deep Learning