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The Shigella flexneri effector IpaH1.4 facilitates RNF213 degradation and protects cytosolic bacteria against interferon-induced ubiquitylation.

Publication ,  Journal Article
Saavedra-Sanchez, L; Dickinson, MS; Apte, SS; Zhang, Y; De Jong, M; Skavicus, S; Heaton, NS; Alto, NM; Coers, J
Published in: Elife
November 28, 2025

A central signal that marshals host defense against many infections is the lymphocyte-derived cytokine interferon-gamma (IFNγ). The IFNγ receptor is expressed on most human cells, and its activation leads to the expression of antimicrobial proteins that execute diverse cell-autonomous immune programs. One such immune program consists of the sequential detection, ubiquitylation, and destruction of intracellular pathogens. Recently, the IFNγ-inducible ubiquitin E3 ligase RNF213 was identified as a pivotal mediator of such a defense axis. RNF213 provides host protection against viral, bacterial, and protozoan pathogens. To establish infections, potentially susceptible intracellular pathogens must have evolved mechanisms that subdue RNF213-controlled cell-autonomous immunity. In support of this hypothesis, we demonstrate here that a causative agent of bacillary dysentery, Shigella flexneri, uses the type III secretion system (T3SS) effector IpaH1.4 to induce the degradation of RNF213. S. flexneri mutants lacking IpaH1.4 expression are bound and ubiquitylated by RNF213 in the cytosol of IFNγ-primed host cells. Linear (M1-) and lysine-linked ubiquitylation of S. flexneri requires RNF213 but is independent of the linear ubiquitin chain assembly complex (LUBAC). We find that ubiquitylation of S. flexneri is insufficient to kill intracellular bacteria, suggesting that S. flexneri employs additional virulence factors to escape from host defenses that operate downstream from RNF213-driven ubiquitylation. In brief, this study identified the bacterial IpaH1.4 protein as an inhibitor of mammalian RNF213 and highlights evasion of RNF213-driven immunity as a characteristic of the human-tropic pathogen Shigella.

Duke Scholars

Published In

Elife

DOI

EISSN

2050-084X

Publication Date

November 28, 2025

Volume

13

Location

England

Related Subject Headings

  • Ubiquitination
  • Ubiquitin-Protein Ligases
  • Shigella flexneri
  • Proteolysis
  • Interferon-gamma
  • Humans
  • Host-Pathogen Interactions
  • Hela Cells
  • HeLa Cells
  • Dysentery, Bacillary
 

Citation

APA
Chicago
ICMJE
MLA
NLM
Saavedra-Sanchez, L., Dickinson, M. S., Apte, S. S., Zhang, Y., De Jong, M., Skavicus, S., … Coers, J. (2025). The Shigella flexneri effector IpaH1.4 facilitates RNF213 degradation and protects cytosolic bacteria against interferon-induced ubiquitylation. Elife, 13. https://doi.org/10.7554/eLife.102714
Saavedra-Sanchez, Luz, Mary S. Dickinson, Shruti S. Apte, Yifeng Zhang, Maarten De Jong, Samantha Skavicus, Nicholas S. Heaton, Neal M. Alto, and Jorn Coers. “The Shigella flexneri effector IpaH1.4 facilitates RNF213 degradation and protects cytosolic bacteria against interferon-induced ubiquitylation.Elife 13 (November 28, 2025). https://doi.org/10.7554/eLife.102714.
Saavedra-Sanchez L, Dickinson MS, Apte SS, Zhang Y, De Jong M, Skavicus S, et al. The Shigella flexneri effector IpaH1.4 facilitates RNF213 degradation and protects cytosolic bacteria against interferon-induced ubiquitylation. Elife. 2025 Nov 28;13.
Saavedra-Sanchez, Luz, et al. “The Shigella flexneri effector IpaH1.4 facilitates RNF213 degradation and protects cytosolic bacteria against interferon-induced ubiquitylation.Elife, vol. 13, Nov. 2025. Pubmed, doi:10.7554/eLife.102714.
Saavedra-Sanchez L, Dickinson MS, Apte SS, Zhang Y, De Jong M, Skavicus S, Heaton NS, Alto NM, Coers J. The Shigella flexneri effector IpaH1.4 facilitates RNF213 degradation and protects cytosolic bacteria against interferon-induced ubiquitylation. Elife. 2025 Nov 28;13.

Published In

Elife

DOI

EISSN

2050-084X

Publication Date

November 28, 2025

Volume

13

Location

England

Related Subject Headings

  • Ubiquitination
  • Ubiquitin-Protein Ligases
  • Shigella flexneri
  • Proteolysis
  • Interferon-gamma
  • Humans
  • Host-Pathogen Interactions
  • Hela Cells
  • HeLa Cells
  • Dysentery, Bacillary