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An integrated genomic analysis of human glioblastoma multiforme.

Publication ,  Journal Article
Parsons, DW; Jones, S; Zhang, X; Lin, JC-H; Leary, RJ; Angenendt, P; Mankoo, P; Carter, H; Siu, I-M; Gallia, GL; Olivi, A; McLendon, R ...
Published in: Science
September 26, 2008

Glioblastoma multiforme (GBM) is the most common and lethal type of brain cancer. To identify the genetic alterations in GBMs, we sequenced 20,661 protein coding genes, determined the presence of amplifications and deletions using high-density oligonucleotide arrays, and performed gene expression analyses using next-generation sequencing technologies in 22 human tumor samples. This comprehensive analysis led to the discovery of a variety of genes that were not known to be altered in GBMs. Most notably, we found recurrent mutations in the active site of isocitrate dehydrogenase 1 (IDH1) in 12% of GBM patients. Mutations in IDH1 occurred in a large fraction of young patients and in most patients with secondary GBMs and were associated with an increase in overall survival. These studies demonstrate the value of unbiased genomic analyses in the characterization of human brain cancer and identify a potentially useful genetic alteration for the classification and targeted therapy of GBMs.

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Published In

Science

DOI

EISSN

1095-9203

Publication Date

September 26, 2008

Volume

321

Issue

5897

Start / End Page

1807 / 1812

Location

United States

Related Subject Headings

  • Survival Rate
  • Signal Transduction
  • Sequence Analysis, DNA
  • Polymorphism, Single Nucleotide
  • Oligonucleotide Array Sequence Analysis
  • Mutation, Missense
  • Mutation
  • Middle Aged
  • Male
  • Isocitrate Dehydrogenase
 

Citation

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Parsons, D. W., Jones, S., Zhang, X., Lin, J.-H., Leary, R. J., Angenendt, P., … Kinzler, K. W. (2008). An integrated genomic analysis of human glioblastoma multiforme. Science, 321(5897), 1807–1812. https://doi.org/10.1126/science.1164382
Parsons, D Williams, Siân Jones, Xiaosong Zhang, Jimmy Cheng-Ho Lin, Rebecca J. Leary, Philipp Angenendt, Parminder Mankoo, et al. “An integrated genomic analysis of human glioblastoma multiforme.Science 321, no. 5897 (September 26, 2008): 1807–12. https://doi.org/10.1126/science.1164382.
Parsons DW, Jones S, Zhang X, Lin JC-H, Leary RJ, Angenendt P, et al. An integrated genomic analysis of human glioblastoma multiforme. Science. 2008 Sep 26;321(5897):1807–12.
Parsons, D. Williams, et al. “An integrated genomic analysis of human glioblastoma multiforme.Science, vol. 321, no. 5897, Sept. 2008, pp. 1807–12. Pubmed, doi:10.1126/science.1164382.
Parsons DW, Jones S, Zhang X, Lin JC-H, Leary RJ, Angenendt P, Mankoo P, Carter H, Siu I-M, Gallia GL, Olivi A, McLendon R, Rasheed BA, Keir S, Nikolskaya T, Nikolsky Y, Busam DA, Tekleab H, Diaz LA, Hartigan J, Smith DR, Strausberg RL, Marie SKN, Shinjo SMO, Yan H, Riggins GJ, Bigner DD, Karchin R, Papadopoulos N, Parmigiani G, Vogelstein B, Velculescu VE, Kinzler KW. An integrated genomic analysis of human glioblastoma multiforme. Science. 2008 Sep 26;321(5897):1807–1812.
Journal cover image

Published In

Science

DOI

EISSN

1095-9203

Publication Date

September 26, 2008

Volume

321

Issue

5897

Start / End Page

1807 / 1812

Location

United States

Related Subject Headings

  • Survival Rate
  • Signal Transduction
  • Sequence Analysis, DNA
  • Polymorphism, Single Nucleotide
  • Oligonucleotide Array Sequence Analysis
  • Mutation, Missense
  • Mutation
  • Middle Aged
  • Male
  • Isocitrate Dehydrogenase