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RNA viruses, M satellites, chromosomal killer genes, and killer/nonkiller phenotypes in the 100-genomes S. cerevisiae strains.

Publication ,  Journal Article
Vijayraghavan, S; Kozmin, SG; Strope, PK; Skelly, DA; Magwene, PM; Dietrich, FS; McCusker, JH
Published in: G3 (Bethesda)
September 30, 2023

We characterized previously identified RNA viruses (L-A, L-BC, 20S, and 23S), L-A-dependent M satellites (M1, M2, M28, and Mlus), and M satellite-dependent killer phenotypes in the Saccharomyces cerevisiae 100-genomes genetic resource population. L-BC was present in all strains, albeit in 2 distinct levels, L-BChi and L-BClo; the L-BC level is associated with the L-BC genotype. L-BChi, L-A, 20S, 23S, M1, M2, and Mlus (M28 was absent) were in fewer strains than the similarly inherited 2µ plasmid. Novel L-A-dependent phenotypes were identified. Ten M+ strains exhibited M satellite-dependent killing (K+) of at least 1 of the naturally M0 and cured M0 derivatives of the 100-genomes strains; in these M0 strains, sensitivities to K1+, K2+, and K28+ strains varied. Finally, to complement our M satellite-encoded killer toxin analysis, we assembled the chromosomal KHS1 and KHR1 killer genes and used naturally M0 and cured M0 derivatives of the 100-genomes strains to assess and characterize the chromosomal killer phenotypes.

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Published In

G3 (Bethesda)

DOI

EISSN

2160-1836

Publication Date

September 30, 2023

Volume

13

Issue

10

Location

England

Related Subject Headings

  • Saccharomyces cerevisiae
  • RNA, Viral
  • RNA, Double-Stranded
  • RNA Viruses
  • Phenotype
  • 4905 Statistics
  • 3105 Genetics
  • 3101 Biochemistry and cell biology
  • 0604 Genetics
 

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Vijayraghavan, S., Kozmin, S. G., Strope, P. K., Skelly, D. A., Magwene, P. M., Dietrich, F. S., & McCusker, J. H. (2023). RNA viruses, M satellites, chromosomal killer genes, and killer/nonkiller phenotypes in the 100-genomes S. cerevisiae strains. G3 (Bethesda), 13(10). https://doi.org/10.1093/g3journal/jkad167
Vijayraghavan, Sriram, Stanislav G. Kozmin, Pooja K. Strope, Daniel A. Skelly, Paul M. Magwene, Fred S. Dietrich, and John H. McCusker. “RNA viruses, M satellites, chromosomal killer genes, and killer/nonkiller phenotypes in the 100-genomes S. cerevisiae strains.G3 (Bethesda) 13, no. 10 (September 30, 2023). https://doi.org/10.1093/g3journal/jkad167.
Vijayraghavan S, Kozmin SG, Strope PK, Skelly DA, Magwene PM, Dietrich FS, et al. RNA viruses, M satellites, chromosomal killer genes, and killer/nonkiller phenotypes in the 100-genomes S. cerevisiae strains. G3 (Bethesda). 2023 Sep 30;13(10).
Vijayraghavan, Sriram, et al. “RNA viruses, M satellites, chromosomal killer genes, and killer/nonkiller phenotypes in the 100-genomes S. cerevisiae strains.G3 (Bethesda), vol. 13, no. 10, Sept. 2023. Pubmed, doi:10.1093/g3journal/jkad167.
Vijayraghavan S, Kozmin SG, Strope PK, Skelly DA, Magwene PM, Dietrich FS, McCusker JH. RNA viruses, M satellites, chromosomal killer genes, and killer/nonkiller phenotypes in the 100-genomes S. cerevisiae strains. G3 (Bethesda). 2023 Sep 30;13(10).

Published In

G3 (Bethesda)

DOI

EISSN

2160-1836

Publication Date

September 30, 2023

Volume

13

Issue

10

Location

England

Related Subject Headings

  • Saccharomyces cerevisiae
  • RNA, Viral
  • RNA, Double-Stranded
  • RNA Viruses
  • Phenotype
  • 4905 Statistics
  • 3105 Genetics
  • 3101 Biochemistry and cell biology
  • 0604 Genetics