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Human genetic variation reveals FCRL3 is a lymphocyte receptor for Yersinia pestis.

Publication ,  Journal Article
Keener, RM; Shi, S; Dalapati, T; Wang, L; Reinoso-Vizcaino, NM; Luftig, MA; Miller, SI; Wilson, TJ; Ko, DC
Published in: Cell Genom
September 10, 2025

Yersinia pestis is the bacterium responsible for plague, one of the deadliest diseases in history. To discover human genetic determinants of Y. pestis infection, we utilized nearly 1,000 genetically diverse lymphoblastoid cell lines in a cellular genome-wide association study. A nonsynonymous SNP, rs2282284 (N721S), in Fc receptor-like 3 (FCRL3) was associated with bacterial invasion of host cells (p = 9 × 10-8). Overexpressed FCRL3 facilitated attachment and invasion of Y. pestis and colocalized with Y. pestis at attachment sites. These properties were variably conserved across the FCRL family, revealing an immunoglobulin-like domain and signaling motifs shared by FCRL3 and FCRL5 to be necessary for attachment and invasion. Direct binding to FCRL5 extracellular domain was confirmed, and B cells (the primary cells that express FCRLs) were preferentially invaded by Y. pestis. Thus, Y. pestis hijacks FCRL proteins, possibly taking advantage of an immune receptor to create a lymphocyte niche during infection.

Duke Scholars

Published In

Cell Genom

DOI

EISSN

2666-979X

Publication Date

September 10, 2025

Volume

5

Issue

9

Start / End Page

100917

Location

United States

Related Subject Headings

  • Yersinia pestis
  • Receptors, Immunologic
  • Receptors, Fc
  • Receptors, Cell Surface
  • Polymorphism, Single Nucleotide
  • Plague
  • Lymphocytes
  • Humans
  • Genome-Wide Association Study
  • Genetic Variation
 

Citation

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MLA
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Keener, R. M., Shi, S., Dalapati, T., Wang, L., Reinoso-Vizcaino, N. M., Luftig, M. A., … Ko, D. C. (2025). Human genetic variation reveals FCRL3 is a lymphocyte receptor for Yersinia pestis. Cell Genom, 5(9), 100917. https://doi.org/10.1016/j.xgen.2025.100917
Keener, Rachel M., Sam Shi, Trisha Dalapati, Liuyang Wang, Nicolás M. Reinoso-Vizcaino, Micah A. Luftig, Samuel I. Miller, Timothy J. Wilson, and Dennis C. Ko. “Human genetic variation reveals FCRL3 is a lymphocyte receptor for Yersinia pestis.Cell Genom 5, no. 9 (September 10, 2025): 100917. https://doi.org/10.1016/j.xgen.2025.100917.
Keener RM, Shi S, Dalapati T, Wang L, Reinoso-Vizcaino NM, Luftig MA, et al. Human genetic variation reveals FCRL3 is a lymphocyte receptor for Yersinia pestis. Cell Genom. 2025 Sep 10;5(9):100917.
Keener, Rachel M., et al. “Human genetic variation reveals FCRL3 is a lymphocyte receptor for Yersinia pestis.Cell Genom, vol. 5, no. 9, Sept. 2025, p. 100917. Pubmed, doi:10.1016/j.xgen.2025.100917.
Keener RM, Shi S, Dalapati T, Wang L, Reinoso-Vizcaino NM, Luftig MA, Miller SI, Wilson TJ, Ko DC. Human genetic variation reveals FCRL3 is a lymphocyte receptor for Yersinia pestis. Cell Genom. 2025 Sep 10;5(9):100917.

Published In

Cell Genom

DOI

EISSN

2666-979X

Publication Date

September 10, 2025

Volume

5

Issue

9

Start / End Page

100917

Location

United States

Related Subject Headings

  • Yersinia pestis
  • Receptors, Immunologic
  • Receptors, Fc
  • Receptors, Cell Surface
  • Polymorphism, Single Nucleotide
  • Plague
  • Lymphocytes
  • Humans
  • Genome-Wide Association Study
  • Genetic Variation