Journal ArticleEvolution; international journal of organic evolution · January 2024
The floras on chemically and physically challenging soils, such as gypsum, shale, and serpentine, are characterized by narrowly endemic species. The evolution of edaphic endemics may be facilitated or constrained by genetic correlations among traits contri ...
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Journal ArticleBioScience · March 1, 2023
When students answer test questions incorrectly, we often assume they don’t understand the content; instead, they may struggle with certain cognitive skills or with how questions are asked. Our goal was to look beyond content to understand what makes asses ...
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Journal ArticleProceedings. Biological sciences · April 2021
Ecological divergence is a fundamental source of phenotypic diversity between closely related species, yet the genetic architecture of most ecologically relevant traits is poorly understood. Differences in elevation can impose substantial divergent selecti ...
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Journal ArticleJournal of biological rhythms · October 2020
Environmental variation along an elevational gradient can yield phenotypic differentiation resulting from varying selection pressures on plant traits related to seasonal responses. Thus, genetic clines can evolve in a suite of traits, including the circadi ...
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Journal ArticleCurrent biology : CB · January 2020
Genomic conflicts may play a central role in the evolution of reproductive barriers. Theory predicts that early-onset hybrid inviability may stem from conflict between parents for resource allocation to offspring. Here, we describe M. decorus: a group of c ...
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Journal ArticleFrontiers in plant science · January 2020
The double fertilization of the female gametophyte initiates embryogenesis and endosperm development in seeds via the activation of genes involved in cell differentiation, organ patterning, and growth. A subset of genes expressed in endosperm exhibi ...
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Journal ArticleMolecular ecology · March 2019
Chromosomal inversions can play an important role in adaptation, but the mechanism of their action in many natural populations remains unclear. An inversion could suppress recombination between locally beneficial alleles, thereby preventing maladaptive res ...
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Journal ArticleEcology · December 2018
Closely related, ecologically similar species are often separated at small geographic scales while being broadly sympatric. Both adaptation to abiotic environmental conditions and a variety of biotic interactions may determine small-scale allopatry. In Nor ...
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Journal ArticleMolecular ecology · December 2018
Spatially varying selection is a critical driver of adaptive differentiation. Yet, there are few examples where the fitness effects of naturally segregating variants that contribute to local adaptation have been measured in the field. Plant adaptation to h ...
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Journal ArticleScience (New York, N.Y.) · August 2018
To understand evolutionary factors that maintain complex trait variation, we sequenced genomes from a single population of the plant Mimulus guttatus, identifying hundreds of nucleotide variants associated with morphological and life history traits. ...
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Journal ArticleEvolution Letters · August 1, 2018
Understanding morphological diversity—and morphological constraint—has been a central question in evolutionary biology since its inception. Nematodes of the genus Caenorhabditis, which contains the well-studied model organism C. elegans, display remarkable ...
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Journal ArticleEvolution; international journal of organic evolution · June 2018
Understanding which environmental variables and traits underlie adaptation to harsh environments is difficult because many traits evolve simultaneously as populations or species diverge. Here, we investigate the ecological variables and traits that underli ...
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Journal ArticleAmerican journal of botany · April 2018
Premise of the studyAngiosperms have evolved multiple breeding systems that allow reproductive success under varied conditions. Striking among these are cleistogamous breeding systems, where individuals can produce alternative flower types special ...
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Journal ArticleProceedings of the National Academy of Sciences of the United States of America · July 2017
The interplay of divergent selection and gene flow is key to understanding how populations adapt to local environments and how new species form. Here, we use DNA polymorphism data and genome-wide variation in recombination rate to jointly infer the strengt ...
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Journal ArticleJournal of biological rhythms · February 2017
The increasing demand for improved agricultural production will require more efficient breeding for traits that maintain yield under heterogeneous environments. The internal circadian oscillator is essential for perceiving and coordinating environmental cu ...
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Journal ArticleMolecular ecology · January 2017
The genetic architecture of local adaptation has been of central interest to evolutionary biologists since the modern synthesis. In addition to classic theory on the effect size of adaptive mutations by Fisher, Kimura and Orr, recent theory addresses the g ...
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Journal ArticleMolecular ecology · January 2017
Across western North America, Mimulus guttatus exists as many local populations adapted to site-specific environmental challenges. Gene flow between locally adapted populations will affect genetic diversity both within demes and across the larger metapopul ...
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Journal ArticleThe New phytologist · May 2016
Divergence of developmental mechanisms within populations could lead to hybrid developmental failure, and might be a factor driving speciation in angiosperms. We investigate patterns of endosperm and embryo development in Mimulus guttatus and the closely r ...
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Journal ArticleGenetics · April 2016
Polymorphic chromosomal rearrangements can bind hundreds of genes into single genetic loci with diverse effects. Rearrangements are often associated with local adaptation and speciation and may also be an important component of genetic variation within pop ...
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Journal ArticleAnnals of botany · August 2015
Background and aimsThe genetic basis of leaf shape has long interested botanists because leaf shape varies extensively across the plant kingdom and this variation is probably adaptive. However, knowledge of the genetic architecture of leaf shape v ...
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Journal ArticleMolecular ecology · January 2015
Differential natural selection acting on populations in contrasting environments often results in adaptive divergence in multivariate phenotypes. Multivariate trait divergence across populations could be caused by selection on pleiotropic alleles or throug ...
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Journal ArticlePhilosophical transactions of the Royal Society of London. Series B, Biological sciences · August 2014
Speciation can occur on both large and small geographical scales. In plants, local speciation, where small populations split off from a large-ranged progenitor species, is thought to be the dominant mode, yet there are still few examples to verify speciati ...
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Journal ArticleMolecular ecology · June 2014
Chromosomal rearrangement polymorphisms are common and increasingly found to be associated with adaptive ecological divergence and speciation. Rearrangements, such as inversions, reduce recombination in heterozygous individuals and thus can protect favoura ...
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Journal ArticleHeredity · May 2014
Changes in chromosome number and structure are important contributors to adaptation, speciation and macroevolution. In flowering plants, polyploidy and subsequent reductions in chromosome number by fusion are major sources of chromosomal evolution, but chr ...
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Journal ArticleGenome biology and evolution · January 2014
Major unresolved questions in evolutionary genetics include determining the contributions of different mutational sources to the total pool of genetic variation in a species, and understanding how these different forms of genetic variation interact with na ...
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Journal ArticleProceedings of the National Academy of Sciences of the United States of America · November 2013
Meiotic recombination rates can vary widely across genomes, with hotspots of intense activity interspersed among cold regions. In yeast, hotspots tend to occur in promoter regions of genes, whereas in humans and mice, hotspots are largely defined by bindin ...
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Journal ArticleMolecular ecology · November 2012
Polyploidy (whole-genome duplication) has contributed significantly to angiosperm evolution and diversification. To date, it has been found that most polyploids are the result of multiple formation events, which may contribute to genetic diversity and affe ...
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Journal ArticleMolecular ecology · August 2012
Why do populations remain genetically variable despite strong continuous natural selection? Mutation reconstitutes variation eliminated by selection and genetic drift, but theoretical and experimental studies each suggest that mutation-selection balance in ...
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Journal ArticleAmerican journal of botany · January 2012
Premise of studyBotanists have long been interested in the reasons for genetic variation among individuals, populations, and species of plants. The anthocyanin pathway is ideal for studying the evolution of such phenotypic variation.Methods
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Journal ArticleAmerican journal of botany · January 2012
Premise of the studyHybridization is pervasive in many plant taxa, with consequences for species taxonomy, local adaptation, and management. Oaks (Quercus spp.) are thought to hybridize readily yet retain distinct traits, drawing into question the ...
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Journal ArticlePloS one · January 2012
Natural variation in the regulation of the accumulation of mineral nutrients and trace elements in plant tissues is crucial to plant metabolism, development, and survival across different habitats. Studies of the genetic basis of natural variation in nutri ...
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Journal ArticleGenome biology and evolution · January 2012
Despite intense investigation for over 25 years, the in vivo structure of plant mitochondrial genomes remains uncertain. Mapping studies and genome sequencing generally produce large circular chromosomes, whereas electrophoretic and microscopic studies typ ...
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Journal ArticleBiology letters · December 2011
Most natural populations display substantial genetic variation in behaviour, morphology, physiology, life history and the susceptibility to disease. A major challenge is to determine the contributions of individual loci to variation in complex traits. Quan ...
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Journal ArticlePLoS Comput Biol · November 2011
We describe a statistical framework for QTL mapping using bulk segregant analysis (BSA) based on high throughput, short-read sequencing. Our proposed approach is based on a smoothed version of the standard G statistic, and takes into account variation in a ...
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Journal ArticleTrends in genetics : TIG · July 2011
Plants provide unique opportunities to study the mechanistic basis and evolutionary processes of adaptation to diverse environmental conditions. Complementary laboratory and field experiments are important for testing hypotheses reflecting long-term ecolog ...
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Journal ArticleCurrent biology : CB · April 2011
Identifying the genetic basis of parallelism reveals the means by which evolution repeats itself and shows what aspects-if any-may be predictable. The recently tetraploid luteus group of Mimulus contains five species native to central Chile, three of which ...
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Journal ArticlePLoS biology · September 2010
The role of chromosomal inversions in adaptation and speciation is controversial. Historically, inversions were thought to contribute to these processes either by directly causing hybrid sterility or by facilitating the maintenance of co-adapted gene compl ...
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Journal ArticlePhilosophical transactions of the Royal Society of London. Series B, Biological sciences · August 2010
The aim of this study is to investigate the evolution of intrinsic postzygotic isolation within and between populations of Mimulus guttatus and Mimulus nasutus. We made 17 intraspecific and interspecific crosses, across a wide geographical scale. We examin ...
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Journal ArticleMolecular ecology · July 2010
Local adaptation is considered to be the result of fitness trade-offs for particular phenotypes across different habitats. However, it is unclear whether such phenotypic trade-offs exist at the level of individual genetic loci. Local adaptation could arise ...
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Journal ArticleOecologia · January 2010
Soil moisture is a key factor affecting plant abundance and distribution, both across and within species. In response to water limitation, plants have evolved numerous morphological, physiological, and phenological adaptations. In both well-watered and wat ...
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Journal ArticleNature reviews. Genetics · November 2009
Inbreeding depression - the reduced survival and fertility of offspring of related individuals - occurs in wild animal and plant populations as well as in humans, indicating that genetic variation in fitness traits exists in natural populations. Inbreeding ...
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Journal ArticleThe New phytologist · August 2009
Evolution of genetic (co)variances (the G-matrix) fundamentally influences multitrait divergence. Here, we isolated the contribution of two chromosomal quantitative trait loci (QTLs), a meiotic drive locus and a polymorphic inversion, to the overall G-matr ...
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Journal ArticleThe New phytologist · August 2009
Local adaptation is a well-established phenomenon whereby habitat-mediated natural selection drives the differentiation of populations. However, little is known about how specific traits and loci combine to cause local adaptation. Here, we conducted a set ...
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Journal ArticleThe New phytologist · August 2009
Deciphering the genetic architecture of phenotypic change provides a framework for understanding how evolution proceeds at a genetic level, and paves the way for work at the molecular level. A series of intra- and interspecific crosses were used to investi ...
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Journal ArticlePhilosophical transactions of the Royal Society of London. Series B, Biological sciences · September 2008
Speciation is characterized by the evolution of reproductive isolation between two groups of organisms. Understanding the process of speciation requires the quantification of barriers to reproductive isolation, dissection of the genetic mechanisms that con ...
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Journal ArticleEvolution; international journal of organic evolution · September 2008
Adaptive divergence due to habitat differences is thought to play a major role in formation of new species. However it is rarely clear the extent to which individual reproductive isolating barriers related to habitat differentiation contribute to total iso ...
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Journal ArticleGenetics · July 2008
Divergent populations are intrinsically reproductively isolated when hybrids between them either fail to develop properly or do not produce viable offspring. Intrinsic isolation may result from Dobzhansky-Muller (DM) incompatibilities, in which deleterious ...
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Journal ArticleEvolution; international journal of organic evolution · May 2008
Cytoplasmic male sterility (CMS) and nuclear fertility restoration (Rf) involves intergenomic coevolution. Although male-sterile phenotypes are rarely expressed in natural populations of angiosperms, CMS genes are thought to be common. The evolutionary dyn ...
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Journal ArticleAnnals of botany · April 2008
Background and aimsAdaptation to different pollinators is thought to drive divergence in flower colour and morphology, and may lead to interspecific reproductive isolation. Floral diversity was tested for association with divergent pollinator pref ...
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Journal ArticleMolecular ecology · April 2008
Here we report our characterization of a widespread, highly selfing Mimulus allotetraploid formed by interspecific hybridization between M. nasutus and M. guttatus. Nucleotide variation at two nuclear loci (mCYCA and mAP3) within and among tetraploid popul ...
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Journal ArticleThe New phytologist · January 2008
In flowering plants, pollen limitation has been proposed to intensify selection on floral characters important in pollinator attraction, but may also select for traits that increase seed set through autonomous selfing. Here, a factorial design (+/- pollen ...
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Journal ArticleNature reviews. Genetics · November 2007
Although many studies provide examples of evolutionary processes such as adaptive evolution, balancing selection, deleterious variation and genetic drift, the relative importance of these selective and stochastic processes for phenotypic variation within a ...
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Journal ArticleScience (New York, N.Y.) · August 2007
Like the formation of animal species, plant speciation is characterized by the evolution of barriers to genetic exchange between previously interbreeding populations. Prezygotic barriers, which impede mating or fertilization between species, typically cont ...
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Journal ArticleGenetics · August 2007
We report the construction of a linkage map for the moss Ceratodon purpureus (n = 13), based on a cross between geographically distant populations, and provide the first experimental confirmation of maternal chloroplast inheritance in bryophytes. From a ma ...
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Journal ArticleEvolution; international journal of organic evolution · January 2007
Speciation often involves the evolution of numerous prezygotic and postzygotic isolating barriers between divergent populations. Detailed knowledge of the strength and nature of those barriers provides insight into ecological and genetic factors that direc ...
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Journal ArticleEvolution; international journal of organic evolution · January 2007
Understanding the process by which hybrid incompatibility alleles become established in natural populations remains a major challenge to evolutionary biology. Previously, we discovered a two-locus Dobzhansky-Muller incompatibility that causes severe hybrid ...
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Journal ArticleEvolution; international journal of organic evolution · December 2006
The timing of when to initiate reproduction is an important transition in any organism's life cycle. There is much variation in flowering time among populations, but we do not know to what degree this variation contributes to local adaptation. Here we use ...
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Journal ArticleJournal of molecular evolution · October 2006
Polyploidization is a prevalent mode of genome diversification within plants. Most gene duplicates arising from polyploidization (paralogs) are typically lost, although a subset may be maintained under selection due to dosage, partitioning of gene function ...
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Journal ArticleEvolution; international journal of organic evolution · July 2006
Multilocus interactions (also known as Dobzhansky-Muller incompatibilities) are thought to be the major source of hybrid inviability and sterility. Because cytoplasmic and nuclear genomes have conflicting evolutionary interests and are often highly coevolv ...
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Journal ArticleGenetics · April 2006
Much evidence has shown that postzygotic reproductive isolation (hybrid inviability or sterility) evolves by the accumulation of interlocus incompatibilities between diverging populations. Although in theory only a single pair of incompatible loci is neede ...
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Journal ArticleGenetics · March 2006
Evolutionary biologists seek to understand the genetic basis for multivariate phenotypic divergence. We constructed an F2 mapping population (N = 539) between two distinct populations of Mimulus guttatus. We measured 20 floral, vegetative, and life-history ...
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Journal ArticleAmerican journal of botany · August 2005
Duplication of some floral regulatory genes has occurred repeatedly in angiosperms, whereas others are thought to be single-copy in most lineages. We selected three genes that interact in a pathway regulating floral development conserved among higher trico ...
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Journal ArticleGenetics · May 2005
We constructed a genetic linkage map between two divergent populations of Mimulus guttatus. We genotyped an F(2) mapping population (N = 539) at 154 AFLP, microsatellite, and gene-based markers. A framework map was constructed consisting of 112 marker loci ...
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Journal ArticleGenetics · January 2005
We report the discovery, mapping, and characterization of a meiotic drive locus (D) exhibiting nearly 100% nonrandom transmission in hybrids between two species of yellow monkeyflowers, outcrossing Mimulus guttatus and selfing M. nasutus. Only 1% of F(2) h ...
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Journal ArticleEvolution; international journal of organic evolution · November 2003
The evolutionary transition from outcrossing to self-fertilization has far-reaching implications for patterns of intraspecific genetic diversity and the potential for speciation. Using DNA sequence variation at two nuclear loci, we examined the divergence ...
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Journal ArticleEvolution; international journal of organic evolution · November 2002
The genetic basis of species differences provides insight into the mode and tempo of phenotypic divergence. We investigate the genetic basis of floral differences between two closely related plant taxa with highly divergent mating systems, Mimulus guttatus ...
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Journal ArticleInternational Journal of Plant Sciences · January 1, 2002
Biparental inbreeding occurs when plants receive pollen from genetically related neighbors. The frequency of biparental inbreeding in natural populations is unknown but directly relevant to the evolution of plant mating systems. We suggest a simple manipul ...
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Journal ArticleEvolution; international journal of organic evolution · October 2001
Both chromosomal rearrangements and negative interactions among loci (Dobzhansky-Muller incompatibilities) have been advanced as the genetic mechanism underlying the sterility of interspecific hybrids. These alternatives invoke very different evolutionary ...
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Journal ArticleEvolution; international journal of organic evolution · May 2001
Mimulus guttatus is a wildflower that exhibits substantial genetic variation in flower size. Here, we test the hypothesis that this variation is caused by deleterious mutations maintained through mutation-selection balance. The deleterious-mutation model p ...
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Journal ArticleGenetics · December 1999
The goal of this study is to provide information on the genetics of inbreeding depression in a primarily outcrossing population of Mimulus guttatus. Previous studies of this population indicate that there is tremendous inbreeding depression for nearly ever ...
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Journal ArticleHeredity · September 1999
The magnitude of inbreeding depression can influence many aspects of a population's ecology and evolution, including the nature of selection acting on the mating system and the chances that the population will go extinct during periods of small population ...
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Journal ArticleProceedings of the National Academy of Sciences of the United States of America · September 1999
The frequency and selective impact of deleterious mutations are fundamental parameters in evolutionary theory, yet they have not been directly measured in a plant species. To estimate these quantities, we allowed spontaneous mutations to accumulate for 10 ...
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Journal ArticleEvolution · January 1, 1999
Severe inbreeding depression is routinely observed in outcrossing species. If inbreeding load is due largely to deleterious alleles of large effect, such as recessive lethals or steriles, then most of it is expected to be purged during brief periods of inb ...
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Journal ArticleHeredity · January 1, 1999
In order to infer population structure at the individual level, we estimated individual inbreeding coefficients and examined the relationship between geographical distance and genetic relatedness from polymorphic microsatellite data for a population of Mim ...
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Journal ArticleEvolution · January 1, 1999
Mildly deleterious mutation has been invoked as a leading explanation for a diverse array of observations in evolutionary genetics and molecular evolution and is thought to be a significant risk of extinction for small populations. However, much of the emp ...
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Journal ArticleMolecular Ecology · January 1, 1998
The evolution of self-fertilization from outcrossing is one of the most common evolutionary transitions in flowering plants. One goal of our research is to develop a linkage map based upon microsatellite loci in Mimulus guttatus and the selfing derivative ...
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Journal ArticleEvolution · January 1, 1996
When populations are partially inbred due to the population structure or to a mixed mating system like partial self-fertilization, some individuals will be more inbred than others. This heterogeneity among individuals in the history of inbreeding can great ...
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Journal ArticleGenetics · November 1995
We use mutation-selection recursion models to evaluate the relative contributions of mutation and inbreeding history to variation among individuals in inbreeding depression and the ability of experiments to detect associations between individual inbreeding ...
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Journal ArticleGenetics · October 1994
An experiment was conducted to investigate the offspring-parent regression for three quantitative traits (weight, abdominal bristles and wing length) in Drosophila melanogaster. Linear and polynomial models were fitted for the regressions of a character in ...
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Journal ArticleEvolution · January 1, 1993
Determined whether synergism exists for genes affecting fitness components in two partially selfing populations of monkey flower. For each wild population, a large randomly mated base population was constructed and many independent lines, inbred to differi ...
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Journal ArticleHeredity · January 1, 1993
Inbreeding depression is likely to be a common selective force opposing the automatic selective advantage of self-fertilization in self-compatible plants and animals, yet relatively few studies have measured both the breeding system and inbreeding depressi ...
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