Journal ArticleElectronic Structure · December 1, 2024
This Roadmap article provides a succinct, comprehensive overview of the state of electronic structure (ES) methods and software for molecular and materials simulations. Seventeen distinct sections collect insights by 51 leading scientists in the field. Eac ...
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Journal ArticleChemistry of materials : a publication of the American Chemical Society · October 2024
Halide argyrodite solid-state electrolytes of the general formula Li6PS5X exhibit complex static and dynamic disorder that plays a crucial role in ion transport processes. Here, we unravel the rich interplay between site disor ...
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Journal ArticleModelling and Simulation in Materials Science and Engineering · September 1, 2024
Science is and always has been based on data, but the terms ‘data-centric’ and the ‘4th paradigm’ of materials research indicate a radical change in how information is retrieved, handled and research is performed. It signifies a transformative shift toward ...
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Journal ArticleJournal of the American Chemical Society · August 2024
Two-dimensional (2D) hybrid organic-inorganic perovskites (HOIPs) offer an outstanding opportunity for spin-related technologies owing in part to their tunable structural symmetry breaking and distortions driven by organic-inorganic hydrogen (H) bonds. How ...
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Journal ArticleACS Materials Letters · July 1, 2024
Overcoming the constraints of single-cation phases and further enhancing structural asymmetry represent critical objectives for optimizing emergent optoelectronic and spin-related properties in two-dimensional (2D) hybrid organic-inorganic perovskites (HOI ...
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Journal ArticleThe Journal of chemical physics · July 2024
Hybrid density functional approximations (DFAs) offer compelling accuracy for ab initio electronic-structure simulations of molecules, nanosystems, and bulk materials, addressing some deficiencies of computationally cheaper, frequently used semilocal DFAs. ...
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Journal ArticleElectronic Structure · June 1, 2024
This paper reports and benchmarks a new implementation of nuclear magnetic resonance shieldings, magnetizabilities, and J-couplings for molecules within semilocal density functional theory, based on numeric atom-centered orbital (NAO) basis sets. NAO basis ...
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Journal ArticleChemistry of Materials · January 9, 2024
Recently, there has been extensive research into photovoltaic, thermoelectric, and nonlinear optical applications of chalcogenide semiconductors within the large set of defect-resistant I2-II-IV-X4 (I = Li, Cu, Ag; II = Ba, Sr, Eu, Pb; IV = Si, Ge, Sn; X = ...
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Journal ArticleJPhys Energy · January 1, 2024
Hybrid organic-inorganic perovskites (HOIPs) such as methylammonium lead iodide (MAPbI3) are promising candidates for use in photovoltaic cells and other semiconductor applications, but their limited chemical stability poses obstacles to their widespread u ...
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Journal ArticleNature chemistry · December 2023
Two-dimensional organic semiconductor-incorporated perovskites are a promising family of hybrid materials for optoelectronic applications, owing in part to their inherent quantum well architecture. Tuning their structures and properties for specific proper ...
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Journal ArticlePhysical review letters · December 2023
The coupled quantum dynamics of electrons and protons is ubiquitous in many dynamical processes involving light-matter interaction, such as solar energy conversion in chemical systems and photosynthesis. A first-principles description of such nuclear-elect ...
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Journal ArticleChemistry of Materials · November 14, 2023
Chiral organic building blocks can be incorporated into hybrid organic-inorganic metal-halide crystalline semiconductors so as to control and impact the interconversion between light, charge, and spin. Here, we report a series of hybrid antimony and bismut ...
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Journal ArticleTrends in Chemistry · October 1, 2023
Over the past decade, hybrid perovskite research has evolved to a point where the literature contains an enormous volume of chemical and physical information. However, many essential material design challenges remain open for researchers to address. The di ...
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Journal ArticleModelling and Simulation in Materials Science and Engineering · September 1, 2023
Electronic structure calculations have been instrumental in providing many important insights into a range of physical and chemical properties of various molecular and solid-state systems. Their importance to various fields, including materials science, ch ...
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Journal ArticleJ Am Chem Soc · August 16, 2023
Cation mixing in two-dimensional (2D) hybrid organic-inorganic perovskite (HOIP) structures represents an important degree of freedom for modifying organic templating effects and tailoring inorganic structures. However, the limited number of known cation-m ...
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Journal ArticleAdvanced Optical Materials · June 19, 2023
Chiral perovskite nanocrystals have emerged as an interesting chiral excitonic platform that combines both structural flexibility and superior optoelectronic properties. Despite several recent demonstrations of optical activity in various chiral perovskite ...
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Journal ArticleAdvanced Functional Materials · May 17, 2023
Electron–phonon interactions play an essential role in charge transport and transfer processes in semiconductors. For most structures, tailoring electron–phonon interactions for specific functionality remains elusive. Here, it is shown that, in hybrid pero ...
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Dataset · March 8, 2023
Electron-phonon interactions play an essential role in charge transport and transfer processes in semiconductors. For most structures, tailoring electron-phonon interactions for specific functionality remains elusive. Here, we show that, in hybrid perovski ...
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Dataset · February 28, 2023
Chiral perovskite nanocrystals have emerged as an interesting chiral excitonic platform that combines both structural flexibility and superior optoelectronic properties. Despite several recent demonstrations of optical activity in various chiral perovskite ...
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Journal ArticleJournal of the American Chemical Society · February 2023
The development of metal halide perovskite/perovskite heterostructures is hindered by rapid interfacial halide diffusion leading to mixed alloys rather than sharp interfaces. To circumvent this outcome, we developed an ion-blocking layer consisting of sing ...
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Journal ArticleChemistry of Materials · January 24, 2023
Recently, bournonite (CuPbSbS3) has been identified as a potential ferroelectric photovoltaic (PV) material with a 1.3 eV band gap, which falls in an appropriate range for single-junction PV devices. Progress in applying bournonite has yielded several stud ...
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Journal ArticleJournal of chemical theory and computation · January 2023
We demonstrate the use of Googles cloud-based Tensor Processing Units (TPUs) to accelerate and scale up conventional (cubic-scaling) density functional theory (DFT) calculations. Utilizing 512 TPU cores, we accomplish the largest such DFT computation to da ...
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Journal ArticleThe Journal of chemical physics · November 2022
Machine learning techniques have received growing attention as an alternative strategy for developing general-purpose density functional approximations, augmenting the historically successful approach of human-designed functionals derived to obey mathemati ...
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Journal ArticleJournal of chemical theory and computation · September 2022
We develop and implement a formalism which enables calculating the analytical gradients of particle-hole random-phase approximation (RPA) ground-state energy with respect to the atomic positions within the atomic orbital basis set framework. Our approach i ...
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Journal ArticleJournal of the American Chemical Society · August 2022
Two-dimensional hybrid organic-inorganic perovskite (HOIP) semiconductors with pronounced spin splitting, mediated by strong spin-orbit coupling and inversion symmetry breaking, offer the potential for spin manipulation in future spintronic applications. H ...
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Journal ArticleAdvanced Functional Materials · June 1, 2022
The authors investigate how chiral ligands attached to perovskite nanocrystal (PNC) surfaces structurally distort the perovskite lattice. Chiral electro-optical properties of the resulting PNCs are demonstrated through the fabrication of a circularly polar ...
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Journal ArticlePhysical Review Materials · June 1, 2022
In the field of van der Waals heterostructures, the twist angle between stacked two-dimensional layers has been identified to be of utmost importance for the properties of the heterostructures. In this context, we previously reported the growth of a single ...
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Journal ArticleThe Journal of chemical physics · June 2022
The nuclear-electronic orbital (NEO) method is a well-established approach for treating nuclei quantum mechanically in molecular systems beyond the usual Born-Oppenheimer approximation. In this work, we present a strategy to implement the NEO method for pe ...
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Journal ArticleChemistry of Materials · April 12, 2022
Mixed-halide two-dimensional (2D) hybrid organic-inorganic perovskites offer an important opportunity to control the band gap for applications in optoelectronic devices. This study focuses on phenethylammonium lead halide [(PEA)2Pb(I1-xBrx)4] films, the pu ...
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Journal ArticleJournal of chemical theory and computation · March 2022
We present an accurate computational approach to calculate absolute K-edge core electron excitation energies as measured by X-ray absorption spectroscopy. Our approach employs an all-electron Bethe-Salpeter equation (BSE) formalism based on GW
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Journal ArticleInorganic chemistry · February 2022
Quaternary chalcogenide semiconductors are promising materials for energy conversion and nonlinear optical applications, with properties tunable primarily by varying the elemental composition and crystal structure. Here, we first analyze the connections am ...
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Journal ArticleNanoscale · January 2022
Two-dimensional metal-halide perovskites (MHPs) are versatile solution-processed organic/inorganic quantum wells where the structural anisotropy creates profound anisotropy in their electronic and excitonic properties and associated optical constants. We h ...
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Journal ArticleChemphyschem : a European journal of chemical physics and physical chemistry · October 2021
An in-depth theoretical analysis of key chemical equilibria in Signal Amplification by Reversible Exchange (SABRE) is provided, employing density functional theory calculations to characterize the likely reaction network. For all reactions in the network, ...
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Journal ArticleChemphyschem : a European journal of chemical physics and physical chemistry · October 2021
The front cover artwork is provided by the groups of Prof. Thomas Theis (North Carolina State University) Prof. Volker Blum (Duke University). The image shows the reaction network of Signal Amplification by Reversible Exchange (SABRE), elucidated by densit ...
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Journal ArticleThe Journal of chemical physics · October 2021
Real-time time-dependent density functional theory (RT-TDDFT) is an attractive tool to model quantum dynamics by real-time propagation without the linear response approximation. Sharing the same technical framework of RT-TDDFT, imaginary-time time-dependen ...
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Journal ArticleInorganic chemistry · August 2021
Quaternary chalcogenide materials have long been a source of semiconductors for optoelectronic applications. Recent studies on I2-II-IV-X4 (I = Ag, Cu, Li; II = Ba, Sr, Eu, Pb; IV = Si, Ge, Sn; X = S, Se) materials have shown particul ...
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Journal ArticleNature communications · August 2021
Two-dimensional (2D) hybrid metal halide perovskites have emerged as outstanding optoelectronic materials and are potential hosts of Rashba/Dresselhaus spin-splitting for spin-selective transport and spin-orbitronics. However, a quantitative microscopic un ...
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Journal ArticleJournal of Materials Chemistry A · July 14, 2021
Excited-state interactions between organic and inorganic components in hybrid metal halide semiconductors open up the possibility of moving charge and energy in deliberate ways, including energy funneling, triplet energy harvesting, or long-lived charge se ...
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Journal ArticlePhysical Review B · June 15, 2021
We describe and benchmark the quasi-four-component (Q4C) approach to relativistic density functional simulations of molecules and solids, using precise, numerically tabulated atom-centered orbital (NAO) basis sets to discretize Dirac's equation. The Q4C ap ...
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Journal ArticleThe Journal of chemical physics · June 2021
We implement and benchmark the frozen core approximation, a technique commonly adopted in electronic structure theory to reduce the computational cost by means of mathematically fixing the chemically inactive core electron states. The accuracy and efficien ...
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Journal ArticleComputer Physics Communications · May 1, 2021
The solution of eigenproblems is often a key computational bottleneck that limits the tractable system size of numerical algorithms, among them electronic structure theory in chemistry and in condensed matter physics. Large eigenproblems can easily exceed ...
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Journal ArticleACS applied materials & interfaces · March 2021
Perovskite solar cells have received substantial attention due to their potential for low-cost photovoltaic devices on flexible or rigid substrates. Thiocyanate (SCN)-containing additives, such as MASCN (MA = methylammonium), have been shown to control per ...
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Journal ArticlePhysical Review Materials · January 1, 2021
We present an all-electron, periodic G0W0 implementation within the numerical atomic orbital (NAO) basis framework. A localized variant of the resolution-of-the-identity (RI) approximation is employed to significantly reduce the computational cost of evalu ...
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Journal ArticleNature Energy · December 1, 2020
One major concern for the commercialization of perovskite photovoltaic technology is the toxicity of lead from the water-soluble lead halide perovskites that can contaminate the environment. Here, we report an abundant, low-cost and chemically robust catio ...
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Journal ArticleComputer Physics Communications · November 1, 2020
Routine applications of electronic structure theory to molecules and periodic systems need to compute the electron density from given Hamiltonian and, in case of non-orthogonal basis sets, overlap matrices. System sizes can range from few to thousands or, ...
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Journal ArticleComputer Physics Communications · September 1, 2020
We present an implementation of all-electron density-functional theory for massively parallel GPU-based platforms, using localized atom-centered basis functions and real-space integration grids. Special attention is paid to domain decomposition of the prob ...
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Journal ArticleThe Journal of chemical physics · September 2020
We present a relativistic correction scheme to improve the accuracy of 1s core-level binding energies calculated from Green's function theory in the GW approximation, which does not add computational overhead. An element-specific corrective term is derived ...
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Journal ArticleNature communications · September 2020
Translation of chirality and asymmetry across structural motifs and length scales plays a fundamental role in nature, enabling unique functionalities in contexts ranging from biological systems to synthetic materials. Here, we introduce a structural chiral ...
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Journal ArticleElectronic Structure · September 1, 2020
The electronic properties of hybrid organic-inorganic semiconductor interfaces depend strongly on the alignment of the electronic carrier levels in the organic/inorganic components. In the present work, we address this energy level alignment from first pri ...
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Journal ArticleChemical communications (Cambridge, England) · August 2020
Here we report on chelating ligands for Signal Amplification By Reversible Exchange (SABRE) catalysts that permit hyperpolarisation on otherwise sterically hindered substrates. We demonstrate 1H enhancements of ∼100-fold over 8.5 T thermal for 2 ...
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Journal ArticleChemistry of Materials · July 14, 2020
In our original manuscript, the energy band structure of Ag2PbSiS4 in the Ama2 structure, shown in Figure 11d and calculated at the level of the hybrid density functional HSE06, was mistakenly calculated without including the effects of spin- orbit couplin ...
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Journal ArticleThe Journal of chemical physics · July 2020
First-principles electronic structure calculations are now accessible to a very large community of users across many disciplines, thanks to many successful software packages, some of which are described in this special issue. The traditional coding paradig ...
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Journal ArticleJournal of the American Chemical Society · July 2020
Incorporating chiral organic molecules into organic/inorganic hybrid 2D metal-halide perovskites results in a novel family of chiral hybrid semiconductors with unique spin-dependent properties. The embedded chiral organic moieties induce a chiroptical resp ...
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Journal ArticleThe Journal of chemical physics · May 2020
A review of the present status, recent enhancements, and applicability of the Siesta program is presented. Since its debut in the mid-1990s, Siesta's flexibility, efficiency, and free distribution have given advanced materials simulation capabilities to ma ...
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Journal ArticleThe Journal of chemical physics · April 2020
For the prototypical two-dimensional hybrid organic-inorganic perovskites (2D HOIPs) (AE4T)PbX4 (X = Cl, Br, and I), we demonstrate that the Frenkel-Holstein Hamiltonian (FHH) can be applied to describe the absorption spectrum arising from the o ...
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Journal ArticleThe Journal of chemical physics · March 2020
DFTB+ is a versatile community developed open source software package offering fast and efficient methods for carrying out atomistic quantum mechanical simulations. By implementing various methods approximating density functional theory (DFT), such as the ...
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Journal ArticleChemistry of Materials · February 25, 2020
Recent work on quaternary semiconductors Cu2BaSn(S,Se)4 and Ag2BaSnSe4 for photovoltaic and thermoelectric applications, respectively, has shown the promise of exploring the broader family of defect-resistant I2-II-IV-X4 materials (where I, II, and IV refe ...
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Journal ArticleThe Journal of chemical physics · January 2020
The Bethe-Salpeter equation (BSE) based on GW quasiparticle levels is a successful approach for calculating the optical gaps and spectra of solids and also for predicting the neutral excitations of small molecules. We here present an all-electron implement ...
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Journal ArticleNature chemistry · December 2019
Semiconductor quantum-well structures and superlattices are key building blocks in modern optoelectronics, but it is difficult to simultaneously realize defect-free epitaxial growth while fine tuning the chemical composition, layer thickness and band struc ...
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Journal ArticleChemistry of Materials · October 22, 2019
Two-dimensional (2D) hybrid organic-inorganic perovskites (HOIPs) represent diverse quantum well heterostructures composed of alternating inorganic and organic layers. While 2D HOIPs are nominally periodic in three dimensions for X-ray scattering, the inor ...
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Journal ArticleMaterials Horizons · October 1, 2019
Hybrid perovskites incorporating conjugated organic cations enable unusual charge carrier interactions among organic and inorganic structural components, but are difficult to prepare as films due to disparate component chemical/physical characteristics (e. ...
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Journal ArticlePhysical Review Materials · August 19, 2019
The structure of the SiC(0001) surface, the C-face of the {0001} SiC surfaces, is studied as a function of temperature and of pressure in a gaseous environment of disilane (Si2H6). Various surface reconstructions are observed, both with and without the pre ...
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Journal ArticleJournal of the American Chemical Society · May 2019
Three-dimensional (3D) hybrid organic-inorganic lead halide perovskites (HOIPs) feature remarkable optoelectronic properties for solar energy conversion but suffer from long-standing issues of environmental stability and lead toxicity. Associated two-dimen ...
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Journal ArticlePhysical review letters · October 2018
For a class of 2D hybrid organic-inorganic perovskite semiconductors based on π-conjugated organic cations, we predict quantitatively how varying the organic and inorganic component allows control over the nature, energy, and localization of carrier states ...
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Journal ArticleChemistry of Materials · September 25, 2018
Recently, the I2-II-IV-VI4 (I = Cu, Ag; II = Ba, Sr; IV = Ge, Sn; VI = S, Se) materials family was identified as a promising source of potential new photovoltaic (PV) and photoelectrochemical (PEC) absorbers. These materials avoid the pitfalls of the succe ...
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Journal ArticlePhysical chemistry chemical physics : PCCP · May 2018
We have performed a genetic algorithm search on the tight-binding interatomic potential energy surface (PES) for small TiN (N = 2-32) clusters. The low energy candidate clusters were further refined using density functional theory (DFT) calculations with t ...
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Journal ArticleComputer Physics Communications · January 1, 2018
Solving the electronic structure from a generalized or standard eigenproblem is often the bottleneck in large scale calculations based on Kohn–Sham density-functional theory. This problem must be addressed by essentially all current electronic structure co ...
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Journal ArticleJournal of chemical theory and computation · November 2017
With the advent of efficient electronic structure methods, effective continuum solvation methods have emerged as a way to, at least partially, include solvent effects into simulations without the need for expensive sampling over solvent degrees of freedom. ...
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Journal ArticleChemistry of Materials · September 26, 2017
Recent work has identified a non-zinc-blende-type quaternary semiconductor, Cu2BaSnS4-xSex (CBTSSe), as a promising candidate for thin-film photovoltaics (PVs). CBTSSe circumvents difficulties of competing PV materials regarding (i) toxicity (e.g., CdTe), ...
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Journal ArticlePhysical Review Materials · August 30, 2017
We quantify the accuracy of different non-self-consistent and self-consistent spin-orbit coupling (SOC) treatments in Kohn-Sham and hybrid density functional theory by providing a band-structure benchmark set for the valence and low-lying conduction energy ...
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Journal ArticleThe journal of physical chemistry letters · July 2017
Parahydrogen is an inexpensive and readily available source of hyperpolarization used to enhance magnetic resonance signals by up to four orders of magnitude above thermal signals obtained at ∼10 T. A significant challenge for applications is fast signal d ...
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Journal ArticleAdvanced Energy Materials · June 21, 2017
The primary amine groups on the heptazine-based polymer melon, also known as graphitic carbon nitride (g-C3N4), can be replaced by urea groups using a two-step postsynthetic functionalization. Under simulated sunlight and optimum Pt loading, this urea-func ...
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Journal ArticleAdvanced materials (Deerfield Beach, Fla.) · June 2017
In recent years, Cu2 ZnSn(S,Se)4 (CZTSSe) materials have enabled important progress in associated thin-film photovoltaic (PV) technology, while avoiding scarce and/or toxic metals; however, cationic disorder and associated band tailin ...
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Journal ArticleChemistry of Materials · May 23, 2017
We quantify the thermodynamic equilibrium conditions that govern the formation of crystalline heptazine-based carbon nitride materials, currently of enormous interest for photocatalytic applications including solar hydrogen evolution. Key phases studied in ...
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Journal ArticleThe journal of physical chemistry letters · April 2017
Using multiwavelets, we have obtained total energies and corresponding atomization energies for the GGA-PBE and hybrid-PBE0 density functionals for a test set of 211 molecules with an unprecedented and guaranteed μHartree accuracy. These quasi-exact refere ...
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Journal ArticleSustainable Energy & Fuels · 2017
A search for photoactive ferroelectric minerals reveals three candidates, which are investigated using first-principles materials modelling. ...
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Journal ArticleScientific reports · November 2016
We derive structural and binding energy trends for twenty amino acids, their dipeptides, and their interactions with the divalent cations Ca2+, Ba2+, Sr2+, Cd2+, Pb2+, and Hg2+. The underlyi ...
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Journal ArticleChemistry of Materials · July 12, 2016
Chalcogenides such as CdTe, Cu(In,Ga)(S,Se)2 (CIGSSe), and Cu2ZnSn(S,Se)4 (CZTSSe) have enabled remarkable advances in thin-film photovoltaic performance, but concerns remain regarding (i) the toxicity (CdTe) and (ii) scarcity (CIGSSe/CdTe) of the constitu ...
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Journal ArticleNature Communications · July 8, 2016
The heptazine-based polymer melon (also known as graphitic carbon nitride, g-C 3 N 4) is a promising photocatalyst for hydrogen evolution. Nonetheless, attempts to improve its inherently low activity are rarely based on rational approaches because of a lac ...
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Journal ArticleACS nano · July 2016
Interfaces and subsurface layers are critical for the performance of devices made of 2D materials and heterostructures. Facile, nondestructive, and quantitative ways to characterize the structure of atomically thin, layered materials are thus essential to ...
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Journal ArticleNature communications · July 2016
The heptazine-based polymer melon (also known as graphitic carbon nitride, g-C3N4) is a promising photocatalyst for hydrogen evolution. Nonetheless, attempts to improve its inherently low activity are rarely based on rational approaches because of a lack o ...
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Journal ArticleScience Advances · March 25, 2016
Conventional magnetic resonance (MR) faces serious sensitivity limitations which can be overcome by hyperpolarization methods, but the most common method (dynamic nuclear polarization) is complex and expensive, and applications are limited by short spin li ...
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Journal ArticleScience (New York, N.Y.) · March 2016
The widespread popularity of density functional theory has given rise to an extensive range of dedicated codes for predicting molecular and crystalline properties. However, each code implements the formalism in a different way, raising questions about the ...
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Journal ArticleScientific data · February 2016
We present a structural data set of the 20 proteinogenic amino acids and their amino-methylated and acetylated (capped) dipeptides. Different protonation states of the backbone (uncharged and zwitterionic) were considered for the amino acids as well as var ...
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Journal ArticlePhysical Review B - Condensed Matter and Materials Physics · November 18, 2015
We follow the evolution of the ionization potential (IP) for the paradigmatic quasi-one-dimensional transacetylene family of conjugated molecules, from short to long oligomers and to the infinite polymer transpolyacetylene (TPA). Our results for short olig ...
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Journal ArticleJournal of chemical information and modeling · November 2015
The identification of low-energy conformers for a given molecule is a fundamental problem in computational chemistry and cheminformatics. We assess here a conformer search that employs a genetic algorithm for sampling the low-energy segment of the conforma ...
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Journal ArticleNew Journal of Physics · September 11, 2015
A key component in calculations of exchange and correlation energies is the Coulomb operator, which requires the evaluation of two-electron integrals. For localized basis sets, these four-center integrals are most efficiently evaluated with the resolution ...
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Journal ArticleComputer Physics Communications · July 1, 2015
We describe a framework to evaluate the Hartree-Fock exchange operator for periodic electronic-structure calculations based on general, localized atom-centered basis functions. The functionality is demonstrated by hybrid-functional calculations of properti ...
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Journal ArticleComputer Physics Communications · May 1, 2015
We derive and implement the strain derivatives of the total energy of solids, i.e., the analytic stress tensor components, in an all-electron, numeric atom-centered orbital based density-functional formalism. We account for contributions that arise in the ...
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Journal ArticlePhysical Review B - Condensed Matter and Materials Physics · April 17, 2015
We address the stability of the surface phases that occur on the C side of 3C-SiC(1¯1¯1¯) at the onset of graphene formation. In this growth range, experimental reports reveal a coexistence of several surface phases. This coexistence can be explained by a ...
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Journal ArticlePhysical review letters · March 2015
We measure the adsorption height of hydrogen-intercalated quasifreestanding monolayer graphene on the (0001) face of 6H silicon carbide by the normal incidence x-ray standing wave technique. A density functional calculation for the full (6√3×6√3)-R30° unit ...
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Journal ArticlePhysical chemistry chemical physics : PCCP · March 2015
Reliable, quantitative predictions of the structure of peptides based on their amino-acid sequence information are an ongoing challenge. We here explore the energy landscapes of two unsolvated 20-residue peptides that result from a shift of the position of ...
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Journal ArticlePhysical chemistry chemical physics : PCCP · February 2015
In the natural peptides, helices are stabilized by hydrogen bonds that point backward along the sequence direction. Until now, there is only little evidence for the existence of analogous structures in oligomers of conformationally unrestricted β amino aci ...
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Journal ArticleJournal of the American Chemical Society · January 2015
This work focuses on the control of the polymerization process for melon ("graphitic carbon nitride"), with the aim of improving its photocatalytic activity intrinsically. We demonstrate here that reduction of the synthesis temperature leads to a mixture o ...
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ConferenceAIP Conference Proceedings · October 6, 2014
In this contribution we detail our efforts to investigate the structural effects of cations binding to peptides and amino acids. We perform first-principles studies employing long-range dispersion-corrected approximate density-functional theory and compare ...
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Journal ArticleJ Phys Chem A · September 4, 2014
We assess the performance of a group of exchange-correlation functionals for predicting the secondary structure of peptide chains, up to a new many-body dispersion corrected hybrid density functional, dubbed PBE0+MBD* by its original authors. For the purpo ...
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Journal ArticleThe Journal of chemical physics · July 2014
We integrate the all-electron electronic structure code FHI-aims into the general ChemShell package for solid-state embedding quantum and molecular mechanical (QM/MM) calculations. A major undertaking in this integration is the implementation of pseudopote ...
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Journal ArticleACS nano · July 2014
Using the minima hopping global optimization method at the density functional level, we found low-energy nanostructures for neutral Au26 and its anion. The local-density and a generalized gradient approximation of the exchange–correlation functional predic ...
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Journal ArticleJournal of physics. Condensed matter : an Institute of Physics journal · May 2014
Obtaining the eigenvalues and eigenvectors of large matrices is a key problem in electronic structure theory and many other areas of computational science. The computational effort formally scales as O(N(3)) with the size of the investigated problem, N (e. ...
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Journal ArticleNew Journal of Physics · December 1, 2013
Growth of nanocrystalline graphene films on (6√3 × 6√3)R30°-reconstructed SiC surfaces was achieved by molecular beam epitaxy, enabling the investigation of quasi-homoepitaxial growth. The structural quality of the graphene films, which is investigated by ...
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Journal ArticleNew Journal of Physics · December 1, 2013
We present a series of numerically tabulated atom-centered orbital (NAO) basis sets with valence-correlation consistency (VCC), termed NAO-VCC-nZ. Here the index 'nZ' refers to the number of basis functions used for the valence shell with n = 2, 3, 4, 5. T ...
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Journal ArticleChemistry (Weinheim an der Bergstrasse, Germany) · August 2013
Specific interactions between cations and proteins have a strong impact on peptide and protein structure. Herein, we shed light on the nature of the underlying interactions, especially regarding effects on the polyamide backbone structure. This was done by ...
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Journal ArticleThe journal of physical chemistry. B · December 2012
We study the initial steps of the interaction of water molecules with two unsolvated peptides: Ac-Ala(5)-LysH(+) and Ac-Ala(8)-LysH(+). Each peptide has two primary candidate sites for water adsorption near the C-terminus: a protonated carboxyl group and t ...
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Journal Article · August 2012
Helices are a key folding motif in protein structure. The question which factors determine helix stability for a given polypeptide or protein is an ongoing challenge. Here we use van der Waals corrected density-functional theory to address a part of this q ...
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Journal ArticleSurface Science · March 15, 2007
Using low energy electron diffraction (LEED), density functional theory (DFT) and scanning tunneling microscopy (STM), we have re-analyzed the Pd (1 0 0) - (sqrt(5) × sqrt(5)) R 27 ° s(-) O surface oxide structure consisting, in the most recent model, of a ...
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Journal ArticlePhysical Review B - Condensed Matter and Materials Physics · July 20, 2006
We describe an iterative procedure which yields an accurate cluster expansion for Au-Pd using only a limited number of ab initio formation enthalpies. Our procedure addresses two problems: (a) given the local-density-approximation (LDA) formation energies ...
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Journal ArticlePhysical Review B - Condensed Matter and Materials Physics · February 1, 2005
The geometrical and chemical structure of the CoAl(111) surface is investigated by quantitative low-energy electron diffraction and calculations applying density functional theory. The stacking sequence of the top four atomic planes is Al-Co-Co-Co, followe ...
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Journal ArticlePhysical Review B - Condensed Matter and Materials Physics · 2004
Traditional sorting diagrams for ground states (T=0 stable atomic configurations) of bcc-based binary alloys predict simple crystal structures when simple parametric interactions (e.g., first few pairs) are assumed. However, the range and magnitude of inte ...
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Journal ArticleJournal of Physics Condensed Matter · June 4, 2003
The stoichiometries and geometric structures formed by the segregation of C, Al and S on a Fe(100) surface have been investigated by Auger electron spectroscopy and quantitative low-energy electron diffraction (LEED). Stepwise annealing of a sputtered surf ...
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Journal ArticleJournal of Physics Condensed Matter · April 29, 2002
The scenario of geometrical relaxation or reconstruction known for the surfaces of elemental solids is enriched by surface segregation in the case of compound surfaces. Both phenomena are consequences of the mere creation of the surface in which atoms in a ...
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Journal ArticlePhysical Review B - Condensed Matter and Materials Physics · 2002
We present a detailed investigation of the c(2×2)-Br/Pt(110) adlayer structure supplemented by the analysis of the (1×2) missing-row (MR) structure of the clean Pt(110) surface. Quantitative low energy electron diffraction analyses and first-principles cal ...
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Journal ArticlePhysical Review B - Condensed Matter and Materials Physics · January 1, 2002
We present a detailed investigation of the (formula presented) adlayer structure supplemented by the analysis of the (formula presented) missing-row (MR) structure of the clean Pt(110) surface. Quantitative low energy electron diffraction analyses and firs ...
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Journal ArticleSurface Science · August 1, 2001
The composition of substitutionally disordered surfaces, including the layer and site dependent distribution of the chemical elements involved, has frequently been a target of quantitative low-energy electron diffraction. In the present paper, we demonstra ...
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Journal ArticleJournal of Physics Condensed Matter · March 5, 2001
The correlation between segregation kinetics and the geometric and chemical structure of iron-rich Fe1-xAlx (100) surfaces was investigated for four samples with different bulk stoichiometries (x = 0.03, 0.15, 0.30, 0.47) using quantitative low-energy elec ...
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Journal ArticleSurface Science · March 1, 2001
The geometrical structure, chemical order and composition of (1 0 0) oriented surfaces of the binary alloy system Fe1-xAlx were investigated in the Fe-rich regime (x = 0.03, 0.15, and 0.30) using quantitative low-energy electron diffraction. Low-energy He+ ...
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Journal ArticleSurface Science · June 20, 2000
Recent apparent discrepancies between results from low-energy electron and X-ray diffraction concerning a reduced in-plane lattice parameter of Cu(100) are resolved in favour of an uncontracted surface. We show that neglecting the energy dependence of the ...
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Journal ArticlePhysical Review B - Condensed Matter and Materials Physics · January 1, 1999
The combination of low-energy electron diffraction intensity analyses and scanning tunneling microscopy was used to investigate the morphology and atomic structure of thin Fe films grown on Au(100) at 400 K. Deposition of only about 0.2 monolayers (ML) Fe ...
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Journal ArticleSurface Science · September 3, 1998
The segregation and ordering behavior of the (100), (110), (210), (310) and (111) surfaces of the ordered intermetallic compound FeAl were investigated by means of AES and LEED. Starting from preferentially sputtered, i.e. Al-depleted surfaces sequential a ...
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Journal ArticlePhysical Review B - Condensed Matter and Materials Physics · January 1, 1998
Following on the success of the recent application of holographic LEED to the determination of the three-dimensional atomic geometry of Si adatoms on a (Formula presented) surface, which enabled that structure to be solved, we show in this paper that a sim ...
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Journal ArticleSurface Review and Letters · 1996
A quantitative structural analysis of CoAl(110)-(1 × 1) by low energy electron diffraction shows that the topmost layer of the surface is rippled by an amplitude of 0.18 Å, with aluminum atoms pulled out of the surface and the average distance to the secon ...
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Journal ArticleSurface Review and Letters · January 1, 1996
A quantitative structural analysis of CoAl(110)-(1 × 1) by low energy electron diffraction shows that the topmost layer of the surface is rippled by an amplitude of 0.18 Å, with aluminum atoms pulled out of the surface and the average distance to the secon ...
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